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MODS oldstds #2146

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1d9e640
first update: new branch 'mods_oldstds'
opkuhn Jan 13, 2026
b02d2b7
first commit of changes to introduce star_arxiv parameter to sensfunc…
opkuhn Jan 15, 2026
f8b0c56
Merge remote-tracking branch 'upstream/develop' into mods_oldstds
opkuhn Mar 30, 2026
ea7a49c
chasing a syntax error
opkuhn Mar 30, 2026
cd51e5c
Merge remote-tracking branch 'upstream/develop' into mods_oldstds
opkuhn Apr 20, 2026
02343a7
Merge remote-tracking branch 'upstream/develop' into mods_oldstds
opkuhn May 6, 2026
c1a82cc
kept only the 10-A standard star tables included in lbtmods_info.txt
opkuhn May 6, 2026
a1a76ed
Merge remote-tracking branch 'upstream/develop' into mods_oldstds
opkuhn May 8, 2026
82ae5a5
Merge remote-tracking branch 'upstream/develop' into mods_oldstds
opkuhn May 15, 2026
a6ab1b6
Merge remote-tracking branch 'origin/mods_oldstds' into mods_oldstds
opkuhn May 22, 2026
1ccb52d
Added comments to standard.py and sensfunc.py
opkuhn May 22, 2026
742c2eb
Merge remote-tracking branch 'upstream/develop' into mods_oldstds
opkuhn Jun 3, 2026
963878c
Reworded the text at the top of the table
opkuhn Jun 3, 2026
76bab35
Merge branch 'mods_oldstds' of github.com:opkuhn/PypeIt into mods_old…
opkuhn Jun 4, 2026
4e91e88
deleted some files
opkuhn Jun 4, 2026
bd013b5
Merge branch 'develop' into mods_oldstds
kbwestfall Jun 17, 2026
df9ead1
modify code and fix tests
kbwestfall Jun 17, 2026
295fd70
doc update
kbwestfall Jun 18, 2026
bd57eff
Merge pull request #2 from kbwestfall/mods_oldstds
opkuhn Jun 22, 2026
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2 changes: 2 additions & 0 deletions doc/detectors.rst
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Expand Up @@ -19,6 +19,8 @@ The datamodel for the

.. include:: include/class_datamodel_detectorcontainer.rst

.. _detectors-table:

Instrument-Specific Data
========================

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15 changes: 8 additions & 7 deletions doc/help/pypeit_cache_github_data.rst
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magellan_fire_long, magellan_mage, mdm_modspec,
mdm_osmos_mdm4k, mdm_osmos_r4k, mmt_binospec,
mmt_bluechannel, mmt_mmirs, not_alfosc, not_alfosc_vert,
ntt_efosc2, p200_dbsp_blue, p200_dbsp_red, p200_ngps_i,
p200_ngps_r, p200_tspec, shane_kast_blue,
shane_kast_red, shane_kast_red_ret, soar_goodman_blue,
soar_goodman_red, subaru_focas, tng_dolores, vlt_fors2,
vlt_sinfoni, vlt_uves_blue, vlt_uves_red,
vlt_xshooter_nir, vlt_xshooter_uvb, vlt_xshooter_vis,
wht_isis_blue, wht_isis_red
ntt_efosc2, p200_dbsp_blue, p200_dbsp_red, p200_ngps_g,
p200_ngps_i, p200_ngps_r, p200_ngps_u, p200_tspec,
shane_kast_blue, shane_kast_red, shane_kast_red_ret,
soar_goodman_blue, soar_goodman_red, soar_tspec,
subaru_focas, tng_dolores, vlt_fors2, vlt_sinfoni,
vlt_uves_blue, vlt_uves_red, vlt_xshooter_nir,
vlt_xshooter_uvb, vlt_xshooter_vis, wht_isis_blue,
wht_isis_red

options:
-h, --help show this help message and exit
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15 changes: 8 additions & 7 deletions doc/help/pypeit_chk_for_calibs.rst
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Expand Up @@ -43,13 +43,14 @@
magellan_fire_long, magellan_mage, mdm_modspec,
mdm_osmos_mdm4k, mdm_osmos_r4k, mmt_binospec,
mmt_bluechannel, mmt_mmirs, not_alfosc, not_alfosc_vert,
ntt_efosc2, p200_dbsp_blue, p200_dbsp_red, p200_ngps_i,
p200_ngps_r, p200_tspec, shane_kast_blue,
shane_kast_red, shane_kast_red_ret, soar_goodman_blue,
soar_goodman_red, subaru_focas, tng_dolores, vlt_fors2,
vlt_sinfoni, vlt_uves_blue, vlt_uves_red,
vlt_xshooter_nir, vlt_xshooter_uvb, vlt_xshooter_vis,
wht_isis_blue, wht_isis_red (default: None)
ntt_efosc2, p200_dbsp_blue, p200_dbsp_red, p200_ngps_g,
p200_ngps_i, p200_ngps_r, p200_ngps_u, p200_tspec,
shane_kast_blue, shane_kast_red, shane_kast_red_ret,
soar_goodman_blue, soar_goodman_red, soar_tspec,
subaru_focas, tng_dolores, vlt_fors2, vlt_sinfoni,
vlt_uves_blue, vlt_uves_red, vlt_xshooter_nir,
vlt_xshooter_uvb, vlt_xshooter_vis, wht_isis_blue,
wht_isis_red (default: None)
-e, --extension EXTENSION
File extension to use. Must include the period (e.g.,
".fits") and it must be one of the allowed extensions
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15 changes: 8 additions & 7 deletions doc/help/pypeit_obslog.rst
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magellan_fire_long, magellan_mage, mdm_modspec,
mdm_osmos_mdm4k, mdm_osmos_r4k, mmt_binospec,
mmt_bluechannel, mmt_mmirs, not_alfosc, not_alfosc_vert,
ntt_efosc2, p200_dbsp_blue, p200_dbsp_red, p200_ngps_i,
p200_ngps_r, p200_tspec, shane_kast_blue,
shane_kast_red, shane_kast_red_ret, soar_goodman_blue,
soar_goodman_red, subaru_focas, tng_dolores, vlt_fors2,
vlt_sinfoni, vlt_uves_blue, vlt_uves_red,
vlt_xshooter_nir, vlt_xshooter_uvb, vlt_xshooter_vis,
wht_isis_blue, wht_isis_red
ntt_efosc2, p200_dbsp_blue, p200_dbsp_red, p200_ngps_g,
p200_ngps_i, p200_ngps_r, p200_ngps_u, p200_tspec,
shane_kast_blue, shane_kast_red, shane_kast_red_ret,
soar_goodman_blue, soar_goodman_red, soar_tspec,
subaru_focas, tng_dolores, vlt_fors2, vlt_sinfoni,
vlt_uves_blue, vlt_uves_red, vlt_xshooter_nir,
vlt_xshooter_uvb, vlt_xshooter_vis, wht_isis_blue,
wht_isis_red

options:
-h, --help show this help message and exit
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15 changes: 8 additions & 7 deletions doc/help/pypeit_ql.rst
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Expand Up @@ -36,13 +36,14 @@
magellan_fire_long, magellan_mage, mdm_modspec,
mdm_osmos_mdm4k, mdm_osmos_r4k, mmt_binospec,
mmt_bluechannel, mmt_mmirs, not_alfosc, not_alfosc_vert,
ntt_efosc2, p200_dbsp_blue, p200_dbsp_red, p200_ngps_i,
p200_ngps_r, p200_tspec, shane_kast_blue,
shane_kast_red, shane_kast_red_ret, soar_goodman_blue,
soar_goodman_red, subaru_focas, tng_dolores, vlt_fors2,
vlt_sinfoni, vlt_uves_blue, vlt_uves_red,
vlt_xshooter_nir, vlt_xshooter_uvb, vlt_xshooter_vis,
wht_isis_blue, wht_isis_red
ntt_efosc2, p200_dbsp_blue, p200_dbsp_red, p200_ngps_g,
p200_ngps_i, p200_ngps_r, p200_ngps_u, p200_tspec,
shane_kast_blue, shane_kast_red, shane_kast_red_ret,
soar_goodman_blue, soar_goodman_red, soar_tspec,
subaru_focas, tng_dolores, vlt_fors2, vlt_sinfoni,
vlt_uves_blue, vlt_uves_red, vlt_xshooter_nir,
vlt_xshooter_uvb, vlt_xshooter_vis, wht_isis_blue,
wht_isis_red

options:
-h, --help show this help message and exit
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15 changes: 8 additions & 7 deletions doc/help/pypeit_setup.rst
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Expand Up @@ -42,13 +42,14 @@
magellan_fire_long, magellan_mage, mdm_modspec,
mdm_osmos_mdm4k, mdm_osmos_r4k, mmt_binospec,
mmt_bluechannel, mmt_mmirs, not_alfosc, not_alfosc_vert,
ntt_efosc2, p200_dbsp_blue, p200_dbsp_red, p200_ngps_i,
p200_ngps_r, p200_tspec, shane_kast_blue,
shane_kast_red, shane_kast_red_ret, soar_goodman_blue,
soar_goodman_red, subaru_focas, tng_dolores, vlt_fors2,
vlt_sinfoni, vlt_uves_blue, vlt_uves_red,
vlt_xshooter_nir, vlt_xshooter_uvb, vlt_xshooter_vis,
wht_isis_blue, wht_isis_red (default: None)
ntt_efosc2, p200_dbsp_blue, p200_dbsp_red, p200_ngps_g,
p200_ngps_i, p200_ngps_r, p200_ngps_u, p200_tspec,
shane_kast_blue, shane_kast_red, shane_kast_red_ret,
soar_goodman_blue, soar_goodman_red, soar_tspec,
subaru_focas, tng_dolores, vlt_fors2, vlt_sinfoni,
vlt_uves_blue, vlt_uves_red, vlt_xshooter_nir,
vlt_xshooter_uvb, vlt_xshooter_vis, wht_isis_blue,
wht_isis_red (default: None)
-r, --root ROOT [ROOT ...]
Root to search for data files. You can provide the top-
level directory (e.g., /data/Kast) or the search string
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15 changes: 8 additions & 7 deletions doc/help/pypeit_trace_edges.rst
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Expand Up @@ -55,13 +55,14 @@
magellan_fire_long, magellan_mage, mdm_modspec,
mdm_osmos_mdm4k, mdm_osmos_r4k, mmt_binospec,
mmt_bluechannel, mmt_mmirs, not_alfosc, not_alfosc_vert,
ntt_efosc2, p200_dbsp_blue, p200_dbsp_red, p200_ngps_i,
p200_ngps_r, p200_tspec, shane_kast_blue,
shane_kast_red, shane_kast_red_ret, soar_goodman_blue,
soar_goodman_red, subaru_focas, tng_dolores, vlt_fors2,
vlt_sinfoni, vlt_uves_blue, vlt_uves_red,
vlt_xshooter_nir, vlt_xshooter_uvb, vlt_xshooter_vis,
wht_isis_blue, wht_isis_red (default: None)
ntt_efosc2, p200_dbsp_blue, p200_dbsp_red, p200_ngps_g,
p200_ngps_i, p200_ngps_r, p200_ngps_u, p200_tspec,
shane_kast_blue, shane_kast_red, shane_kast_red_ret,
soar_goodman_blue, soar_goodman_red, soar_tspec,
subaru_focas, tng_dolores, vlt_fors2, vlt_sinfoni,
vlt_uves_blue, vlt_uves_red, vlt_xshooter_nir,
vlt_xshooter_uvb, vlt_xshooter_vis, wht_isis_blue,
wht_isis_red (default: None)
-b, --binning BINNING
Image binning in spectral and spatial directions. Only
used if providing files directly; default is 1,1.
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15 changes: 8 additions & 7 deletions doc/help/pypeit_view_fits.rst
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Expand Up @@ -28,13 +28,14 @@
magellan_fire_long, magellan_mage, mdm_modspec,
mdm_osmos_mdm4k, mdm_osmos_r4k, mmt_binospec,
mmt_bluechannel, mmt_mmirs, not_alfosc, not_alfosc_vert,
ntt_efosc2, p200_dbsp_blue, p200_dbsp_red, p200_ngps_i,
p200_ngps_r, p200_tspec, shane_kast_blue,
shane_kast_red, shane_kast_red_ret, soar_goodman_blue,
soar_goodman_red, subaru_focas, tng_dolores, vlt_fors2,
vlt_sinfoni, vlt_uves_blue, vlt_uves_red,
vlt_xshooter_nir, vlt_xshooter_uvb, vlt_xshooter_vis,
wht_isis_blue, wht_isis_red
ntt_efosc2, p200_dbsp_blue, p200_dbsp_red, p200_ngps_g,
p200_ngps_i, p200_ngps_r, p200_ngps_u, p200_tspec,
shane_kast_blue, shane_kast_red, shane_kast_red_ret,
soar_goodman_blue, soar_goodman_red, soar_tspec,
subaru_focas, tng_dolores, vlt_fors2, vlt_sinfoni,
vlt_uves_blue, vlt_uves_red, vlt_xshooter_nir,
vlt_xshooter_uvb, vlt_xshooter_vis, wht_isis_blue,
wht_isis_red
file FITS file. Either a Raw file or an Intermediate PypeIt
file

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13 changes: 7 additions & 6 deletions doc/help/run_pypeit.rst
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Expand Up @@ -6,7 +6,7 @@
pypeit_file

PypeIt: The Python Spectroscopic Data Reduction Pipeline
Version 2.0.2.dev229+g08f65ed6b
Version 2.0.2.dev249+g6276c5ac3.d20260428

Available spectrographs include:
aat_uhrf, apf_levy, bok_bc, gemini_flamingos1, gemini_flamingos2,
Expand All @@ -22,11 +22,12 @@
magellan_fire, magellan_fire_long, magellan_mage, mdm_modspec,
mdm_osmos_mdm4k, mdm_osmos_r4k, mmt_binospec, mmt_bluechannel,
mmt_mmirs, not_alfosc, not_alfosc_vert, ntt_efosc2, p200_dbsp_blue,
p200_dbsp_red, p200_ngps_i, p200_ngps_r, p200_tspec, shane_kast_blue,
shane_kast_red, shane_kast_red_ret, soar_goodman_blue,
soar_goodman_red, subaru_focas, tng_dolores, vlt_fors2, vlt_sinfoni,
vlt_uves_blue, vlt_uves_red, vlt_xshooter_nir, vlt_xshooter_uvb,
vlt_xshooter_vis, wht_isis_blue, wht_isis_red
p200_dbsp_red, p200_ngps_g, p200_ngps_i, p200_ngps_r, p200_ngps_u,
p200_tspec, shane_kast_blue, shane_kast_red, shane_kast_red_ret,
soar_goodman_blue, soar_goodman_red, soar_tspec, subaru_focas,
tng_dolores, vlt_fors2, vlt_sinfoni, vlt_uves_blue, vlt_uves_red,
vlt_xshooter_nir, vlt_xshooter_uvb, vlt_xshooter_vis, wht_isis_blue,
wht_isis_red

positional arguments:
pypeit_file PypeIt reduction file (must have .pypeit extension)
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6 changes: 4 additions & 2 deletions doc/include/inst_detector_table.rst
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Expand Up @@ -81,8 +81,10 @@ Instrument Det specaxis specflip spatflip namp gain
``ntt_efosc2`` 1 0 False False 1 0.91 10.0 0.0 -1.0e+10 65535 0.8000 0.1200
``p200_dbsp_blue`` 1 0 True False 1 0.72 2.5 0.0 -1.0e+10 65000.0 0.9538 0.3890
``p200_dbsp_red`` 1 1 False False 1 2.8 8.5 0.0 -1.0e+10 45000.0 0.8889 0.2930
``p200_ngps_i`` 1 1 False False 1 2.8 8.5 0.0 -1.0e+10 65000.0 0.8889 0.5000
``p200_ngps_r`` 1 1 False False 1 2.8 8.5 0.0 -1.0e+10 65000.0 0.8889 0.5000
``p200_ngps_g`` 1 1 True False 1 2.88 8.5 0.0 -1.0e+10 40000.0 0.8889 0.1870
``p200_ngps_i`` 1 1 False False 1 0.86 8.5 0.0 -1.0e+10 40000.0 0.8889 0.1870
``p200_ngps_r`` 1 1 False False 1 0.9 8.5 0.0 -1.0e+10 40000.0 0.8889 0.1870
``p200_ngps_u`` 1 0 True False 1 0.755 8.5 0.0 -1.0e+10 40000.0 0.8889 0.1870
``p200_tspec`` 1 1 True False 1 3.8 3.5 306.0 -1.0e+10 28000 0.9000 0.3700
``shane_kast_blue`` 1 1 False False 2 1.2, 1.2 3.7, 3.7 0.0 -1.0e+10 65535.0 0.7600 0.4300
``shane_kast_red`` 1 0 False False 2 1.9, 1.9 3.8, 3.8 0.0 -1.0e+10 65535.0 0.7600 0.4300
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19 changes: 19 additions & 0 deletions doc/include/lbtmods_table.rst
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@@ -0,0 +1,19 @@
================= ========== ============ ============ ====== =====
File Name RA_2000 DEC_2000 V-MAG TYPE
================= ========== ============ ============ ====== =====
g191b2b_10a.dat G191-B2B 05:05:30.613 +52:49:51.96 11.85 DA.8
gd71_10a.dat GD71 05:52:27.614 +15:53:13.75 13.03 DA1.5
hilt600_10a.dat Hiltner 06:45:13.371 +02:08:14.70 10.44 B1
pg0823_10a.dat PG0823+546 08:26:50.4 +54:28:06 14.32 sdOC
feige34_10a.dat Feige34 10:39:36.740 +43:06:09.26 11.25 sdO
gd140_10a.dat GD140 11:37:05.104 +29:47:58.34 12.45 DA2.2
feige66_10a.dat Feige66 12:37:23.517 +25:03:59.88 10.54 sdO
feige67_10a.dat Feige67 12:41:51.791 +17:31:19.76 11.89 sdO
gd153_10a.dat GD153 12:57:02.337 +22:01:52.68 13.35 DA1.2
hz43_10a.dat HZ43 13:16:21.853 +29:05:55.38 12.91 DA
hz44_10a.dat HZ44 13:23:35.258 +36:07:59.51 11.47 sdB
bd33d2642_10a.dat BD+332642 15:51:59.886 +32:56:54.33 10.8 B2IV
wolf1346_10a.dat Wolf1346 20:34:21.883 +25:03:49.74 11.546 DA2.4
bd28d4211_10a.dat BD+284211 21:51:11.021 +28:51:50.36 10.56 sdOp
feige110_10a.dat Feige110 23:19:58.398 -05:09:56.16 11.88 sdO
================= ========== ============ ============ ====== =====
2 changes: 2 additions & 0 deletions doc/include/spectrographs_table.rst
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Expand Up @@ -57,8 +57,10 @@ not_alfosc_vert :class:`~pypeit.spectrographs.not_alfosc.NOTALFOSCSpec
ntt_efosc2 :class:`~pypeit.spectrographs.ntt_efosc2.NTTEFOSC2Spectrograph` NTT EFOSC2 `Link <https://www.eso.org/sci/facilities/lasilla/instruments/efosc.html>`__ MultiSlit True False The ESO Faint Object Spectrograph and Camera version 2
p200_dbsp_blue :class:`~pypeit.spectrographs.p200_dbsp.P200DBSPBlueSpectrograph` P200 DBSPb `Link <https://sites.astro.caltech.edu/palomar/observer/200inchResources/dbspoverview.html>`__ MultiSlit True False Blue camera
p200_dbsp_red :class:`~pypeit.spectrographs.p200_dbsp.P200DBSPRedSpectrograph` P200 DBSPr `Link <https://sites.astro.caltech.edu/palomar/observer/200inchResources/dbspoverview.html>`__ MultiSlit True False Red camera
p200_ngps_g :class:`~pypeit.spectrographs.p200_ngps.P200NGPSSpectrograph_g` P200 NGPS_g MultiSlit True False g-Channel
p200_ngps_i :class:`~pypeit.spectrographs.p200_ngps.P200NGPSSpectrograph_i` P200 NGPS_i MultiSlit True False i-Channel
p200_ngps_r :class:`~pypeit.spectrographs.p200_ngps.P200NGPSSpectrograph_r` P200 NGPS_r MultiSlit True False r-Channel
p200_ngps_u :class:`~pypeit.spectrographs.p200_ngps.P200NGPSSpectrograph_u` P200 NGPS_u MultiSlit True False u-Channel (read out rotated 90 deg)
p200_tspec :class:`~pypeit.spectrographs.p200_tspec.P200TSPECSpectrograph` P200 TSPEC `Link <https://sites.astro.caltech.edu/palomar/observer/200inchResources/tspeccookbook.html>`__ Echelle True False TripleSpec spectrograph
shane_kast_blue :class:`~pypeit.spectrographs.shane_kast.ShaneKastBlueSpectrograph` SHANE KASTb `Link <http://mthamilton.ucolick.org/techdocs/instruments/kast/>`__ MultiSlit True True
shane_kast_red :class:`~pypeit.spectrographs.shane_kast.ShaneKastRedSpectrograph` SHANE KASTr `Link <http://mthamilton.ucolick.org/techdocs/instruments/kast/>`__ MultiSlit True True
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