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15 changes: 14 additions & 1 deletion lamindb/curators/__init__.py
Original file line number Diff line number Diff line change
Expand Up @@ -402,8 +402,21 @@ def validate(self) -> None:
self._cat_manager_validate()
except pandera.errors.SchemaError as err:
self._is_validated = False
err_msg = str(err)

# Reduce Pandera validation stdout for many columns
if "column" in err_msg and "not in dataframe" in err_msg:
missing_col = err_msg.split("column '")[1].split("'")[0]
actual_cols = list(self._dataset.columns)
col_count = len(actual_cols)
# Show first 10 columns or all if few
display_cols = actual_cols[:10] if col_count > 10 else actual_cols
display_cols_str = ", ".join([f"'{c}'" for c in display_cols])
suffix = "..." if col_count > 10 else ""
err_msg = f"column '{missing_col}' not in dataframe. {col_count} columns in dataframe including: {display_cols_str}{suffix}"

# .exconly() doesn't exist on SchemaError
raise ValidationError(str(err)) from err
raise ValidationError(err_msg) from err
else:
self._cat_manager_validate()

Expand Down