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kmer prefilter died, crashed in Sequence destructor with memory free checksum error

Status: Open.

#1037 In soedinglab/MMseqs2;

· tomgoddard opened on Sep 26, 2025

result2msa: Cannot use result2msa with indexed target database for CA3M output

Status: Open.

#1036 In soedinglab/MMseqs2;

· kelvenr opened on Sep 24, 2025

GPU version, mmseqs expandaln err : getData: local id (4294967295) >= db size (17)

Status: Open.

#1035 In soedinglab/MMseqs2;

· kehan777 opened on Sep 21, 2025

Segmentation fault in prefilter during mmseqs easy-cluster (nucl, k=11, cov-mode 1, min-seq-id 0.98)

Status: Open.

#1031 In soedinglab/MMseqs2;

· a7032018 opened on Sep 4, 2025

linclust results to very rare overlapping clusters

Status: Open.

#1030 In soedinglab/MMseqs2;

· frank-stonybrook opened on Aug 25, 2025

Error: Prefilter died - not enough memory

Status: Open.

#1026 In soedinglab/MMseqs2;

· rneribar opened on Aug 14, 2025

Prefilter process is Killed during nucleotide search (--search-type 3)

Status: Open.

#1024 In soedinglab/MMseqs2;

· ohickl opened on Aug 8, 2025

nucleotide easy-search, query bp length issues

Status: Open.

#1019 In soedinglab/MMseqs2;

· sav-che opened on Jul 21, 2025

Default Threads - createDB Error

Status: Open.

#1016 In soedinglab/MMseqs2;

· emilyhyde opened on Jul 15, 2025

"easy-cluster" clustering output does not include all input sequences

Status: Open.

#1015 In soedinglab/MMseqs2;

· ChongLC opened on Jul 15, 2025

Verbosity for progress in search

Status: Open.

#1014 In soedinglab/MMseqs2;

· luciaurcelay opened on Jul 3, 2025

easy-taxonomy -- aggregatetaxweights died

Status: Open.

#1009 In soedinglab/MMseqs2;

· HaimAshk opened on Jun 24, 2025