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docs: PROJECT_STATUS tracker + persist audit/perf findings - #139

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docs: PROJECT_STATUS tracker + persist audit/perf findings#139
lucapinello wants to merge 1 commit into
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Consolidates all open threads so nothing gets lost, and moves the measured findings out of local scratch into the repo.

  • docs/PROJECT_STATUS.md — living tracker: release lines/branches, every open PR (by line), key measured findings, and the open-threads/TODO list (HF data hosting, precomputed indexes, default references, pig/mouse, org transfer, wiring setup to HF).
  • docs/DOC_AUDIT_2112.md + docs/PERF_TIMING_2112.md — the doc-audit findings and the per-stage timing + peak-memory data from the genome-wide 1000G e2e.

Complements the forward plan in ROADMAP.md (#137).

🤖 Generated with Claude Code

- docs/PROJECT_STATUS.md: living tracker of release lines, open PRs, key findings,
  and open threads/TODO (HF data, precomputed indexes, default references, pig/mouse).
- docs/DOC_AUDIT_2112.md, docs/PERF_TIMING_2112.md: the measured doc-audit and
  per-stage timing/memory findings from the genome-wide e2e (were local scratch).

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
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