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  1. testrepo testrepo Public

    test repository

  2. SECAPR_workflow SECAPR_workflow Public

    This is a series of PBS scripts made to run each SECAPR step, from de novo assembly to trimming of intronic regions (with MAFFT).

    Shell 1

  3. Phylogenomics-Pipeline-using-SECAPR Phylogenomics-Pipeline-using-SECAPR Public

    This repository contains the main steps of a phylogenomics pipeline, from raw data to maximum-likelihood phylogenetic inference. It is based on a loci kit of 406 conserved butterfly protein coding …