Repositories list

• tidydeseq2

  Public
  Repo with code demonstrating tidybulk for DESeq2

  R

  •

  MIT License

  •0•2•0•0•Updated Sep 11, 2025Sep 11, 2025

• tidyprint

  Public
  Centralised biological data tidy abstractions and messaging

  R

  •

  GNU General Public License v3.0

  •0•2•4•0•Updated Sep 10, 2025Sep 10, 2025

• tidySummarizedExperiment

  Public
  Brings SummarizedExperiment to the tidyverse

  genomicstidyversebioconductor+ 3rnaseqtranscriptomicssummarizedexperiment

  R

  •7•26•14•2•Updated Sep 1, 2025Sep 1, 2025

• .github

  Public
  0•1•0•0•Updated Jul 17, 2025Jul 17, 2025

• tidyomicsBlog

  Public
  The blog of tidyomics

  rgenomicstidyverse+ 3bioconductorproteomicstranscriptomics

  HTML

  •

  Other

  •7•14•11•5•Updated Jul 12, 2025Jul 12, 2025

• tidySingleCellExperiment

  Public
  Brings SingleCellExperiment objects to the tidyverse

  ggplot2dplyrplotly+ 7tidyversebioconductortibbletidyrsingle-cell-rna-seqsingle-cell-sequencingsinglecellexperiment

  R

  •10•36•15•4•Updated Jul 11, 2025Jul 11, 2025

• omicslog

  Public
  Log operations of R omic analyses

  bioinformaticsreproducible-researchbioconductor

  R

  •

  GNU General Public License v3.0

  •1•0•2•1•Updated Jul 1, 2025Jul 1, 2025

• plyranges

  Public
  A grammar of genomic data transformation

  genomicsdplyrtidy-data+ 3bioconductordata-analysisgenomic-ranges

  R

  •18•148•38•0•Updated Jun 26, 2025Jun 26, 2025

• tidy-intro-talk

  Public
  Intro talk for tidyomics project

  0•2•0•0•Updated Jun 3, 2025Jun 3, 2025

• tidySpatialWorkshop

  Public
  Tidy spatial analyses workshop

  workshoptidyversebioconductor+ 4spatial-analysisimagingsingle-cell-rna-seqtidyomics

  TeX

  •

  Other

  •13•5•0•2•Updated May 30, 2025May 30, 2025

• tidyomicsWorkshop

  Public
  Tidy genomic and transcriptomic analyses

  TeX

  •

  Other

  •13•1•3•1•Updated May 9, 2025May 9, 2025

• plyinteractions

  Public
  R

  •1•1•1•0•Updated Jul 10, 2024Jul 10, 2024

• tidyomicsWorkshopBioc2023

  Public
  Tidy genomic and transcriptomic analyses

  TeX

  •

  Other

  •13•7•2•0•Updated May 18, 2024May 18, 2024

• tidyomics_paper

  Public
  This repository includes the code used for the tidyomics paper

  R

  •1•1•0•0•Updated Mar 19, 2024Mar 19, 2024

• tidyomics

  Public
  Easily install and load packages from the tidyomcis ecosystem

  genomicstidyversetranscriptomics+ 1cytometry

  R

  •

  MIT License

  •0•68•16•0•Updated Feb 26, 2024Feb 26, 2024

• tidy-genomics-talk

  Public
  R

  •2•17•0•0•Updated Oct 17, 2023Oct 17, 2023

• genomics-todos

  Public
  0•0•14•0•Updated Aug 15, 2023Aug 15, 2023

• tidy-ranges-tutorial

  Public
  TeX

  •0•5•2•0•Updated Aug 3, 2023Aug 3, 2023