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    211 repositories

    • neuroconv

      Public
      Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •30•64•105•28•Updated Oct 3, 2025Oct 3, 2025

    • dandi-annotations

      Public
      HTML
      •
      BSD 3-Clause "New" or "Revised" License
      •0•0•0•4•Updated Oct 3, 2025Oct 3, 2025

    • dan-lab-to-nwb

      Public
      Python
      •
      MIT License
      •0•0•1•1•Updated Oct 3, 2025Oct 3, 2025

    • roiextractors

      Public
      Python-based module for extracting from, converting between, and handling optical imaging data from several file formats. Inspired by SpikeInterface.
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •11•14•27•10•Updated Oct 3, 2025Oct 3, 2025

    • example-notebooks

      Public
      Jupyter Notebook
      •
      Apache License 2.0
      •17•0•0•0•Updated Oct 2, 2025Oct 2, 2025

    • hnasko-lab-to-nwb

      Public
      NWB Conversion project for the Hnasko Lab
      Python
      •
      MIT License
      •0•0•2•3•Updated Oct 2, 2025Oct 2, 2025

    • schwerdt-lab-to-nwb

      Public
      NWB Conversion project for the Schwerdt lab at University of Pittsburgh.
      Python
      •
      MIT License
      •0•0•3•4•Updated Sep 30, 2025Sep 30, 2025

    • IBL-to-nwb

      Public
      Conversion of IBL data to NWB format.
      nwb-conversion
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •5•3•9•3•Updated Sep 29, 2025Sep 29, 2025

    • IBL-mesoscope-to-nwb

      Public
      NWB Conversion project for IBL mesoscope dataset
      Jupyter Notebook
      •
      MIT License
      •0•0•1•2•Updated Sep 29, 2025Sep 29, 2025

    • IBL-widefield-to-nwb

      Public
      NWB Conversion project for the IBL widefield dataset
      Python
      •
      MIT License
      •0•0•1•1•Updated Sep 29, 2025Sep 29, 2025

    • kind-lab-to-nwb

      Public
      NWB Conversion project for the Kind lab.
      Jupyter Notebook
      •
      MIT License
      •2•1•5•3•Updated Sep 26, 2025Sep 26, 2025

    • catalystneuro.github.io

      Public
      TypeScript
      •0•0•0•3•Updated Sep 24, 2025Sep 24, 2025

    • ndx-fiber-photometry

      Public
      This is an NWB extension for storing fiber photometry recordings and associated metadata.
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •0•3•0•0•Updated Sep 24, 2025Sep 24, 2025

    • ndx-ophys-devices

      Public
      This is an NWB extension for storing metadata of devices used in optical experimental setup (microscopy, fiber photometry, optogenetic stimulation etc.)
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •1•1•1•0•Updated Sep 22, 2025Sep 22, 2025

    • turner-lab-to-nwb

      Public
      NWB Conversion project for the Turner lab at the University of Pittsburgh.
      Python
      •
      MIT License
      •0•0•3•0•Updated Sep 11, 2025Sep 11, 2025

    • pagan-lab-to-nwb

      Public
      NWB Conversion project for the Pagan lab.
      Jupyter Notebook
      •
      MIT License
      •0•0•1•2•Updated Sep 4, 2025Sep 4, 2025

    • ndx-subjects

      Public
      An NWB extension for custom species metadata.
      Python
      •
      MIT License
      •0•0•0•1•Updated Sep 4, 2025Sep 4, 2025

    • khaliq-lab-to-nwb

      Public
      Python
      •
      MIT License
      •0•0•0•1•Updated Sep 4, 2025Sep 4, 2025

    • ndx-miniscope

      Public
      Neurodata Without Borders extension for metadata relevant for miniscope acquisition
      ndxoptical-imagingnwb-n
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •1•3•3•1•Updated Sep 4, 2025Sep 4, 2025

    • surmeier-lab-to-nwb

      Public
      Python
      •
      MIT License
      •0•0•1•0•Updated Sep 3, 2025Sep 3, 2025

    • ndx-fscv

      Public
      This NWB extension defines data types for Fast-Scan Cyclic Voltammetry (FSCV), a neurochemical recording technique. It supports storing the applied triangular ramp waveform, measured electrochemical current, and derived cyclic voltammograms used to study dopamine and other neuromodulator dynamics.
      Python
      •
      MIT License
      •0•0•3•0•Updated Sep 3, 2025Sep 3, 2025

    • cookiecutter-my-lab-to-nwb-template

      Public
      The standard cookiecutter template for all lab-specific NWB conversions.
      Python
      •
      MIT License
      •1•2•3•1•Updated Aug 19, 2025Aug 19, 2025

    • dandi-access-vis

      Public
      Python
      •0•0•0•0•Updated Aug 17, 2025Aug 17, 2025

    • jadhav-lab-to-nwb

      Public
      Jupyter Notebook
      •
      MIT License
      •0•0•1•0•Updated Aug 15, 2025Aug 15, 2025

    • GuPPy

      Public
      Guided Photometry Analysis in Python, a free and open-source FP analysis tool.
      Python
      •
      GNU General Public License v3.0
      •13•0•0•0•Updated Aug 12, 2025Aug 12, 2025

    • download-dash

      Public
      Python
      •0•0•0•0•Updated Aug 4, 2025Aug 4, 2025

    • schneider-lab-to-nwb

      Public
      Jupyter Notebook
      •
      MIT License
      •1•0•1•0•Updated Jul 30, 2025Jul 30, 2025

    • hdmf

      Public
      The Hierarchical Data Modeling Framework
      Python
      •
      Other
      •25•0•0•0•Updated Jul 28, 2025Jul 28, 2025

    • access-page

      Public
      Visualizations of data usage across the archive.
      JavaScript
      •1•0•0•0•Updated Jul 25, 2025Jul 25, 2025

    • catalystneuro-dendro-apps

      Public
      CatalystNeuro Dendro Apps
      Python
      •
      MIT License
      •0•0•0•0•Updated Jul 22, 2025Jul 22, 2025