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@NAU-CCL NAU-CCL: Collaborative Computing Lab

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    Repositories list

    14 repositories

    • Epymorph

      Public
      EpiMoRPH spatial disease modeling
      metapopulationepidemiologydisease-modeling
      metapopulationepidemiologydisease-modeling
      Python
      •
      GNU General Public License v3.0
      •3•10•23•1•Updated Sep 25, 2026Sep 25, 2026

    • WNV-Forecasting

      Public
      We developed and compared four mechanistic Ordinary Differential Equation (ODE) model configurations of WNV transmission that differ systematically in whether t…
      R
      •0•0•0•0•Updated Aug 27, 2026Aug 27, 2026

    • FluSight-forecast-hub-2025-26

      Public
      Fork for the 2025-26 season.
      HTML
      •
      MIT License
      •117•0•0•0•Updated May 27, 2026May 27, 2026

    • neurolight-workbench

      Public
      A Python-based platform for automated neuronal image analysis and visualization. Streamlines the processing of microscopy data to accelerate neuroscience resear…
      pythonopencvnumpy
      pythonopencvnumpyneurosciencescipymatplotlibimage-analysispyside6neuroscience-research
      Python
      •
      Apache License 2.0
      •2•3•1•1•Updated May 7, 2026May 7, 2026

    • PMCMC

      Public
      Code for Particle Markov Chain Monte Carlo.
      Jupyter Notebook
      •2•0•0•0•Updated May 27, 2025May 27, 2025

    • Spatiotemporal-Modeling-with-SDH

      Public
      Spatiotemporal modeling of epidemiological data using SDH.
      Jupyter Notebook
      •0•0•0•0•Updated Oct 10, 2024Oct 10, 2024

    • SPHERE

      Public
      Python
      •
      MIT License
      •0•1•5•0•Updated Aug 2, 2024Aug 2, 2024

    • SMC_EPI

      Public
      Particle filter code for research in static and time dependent parameter estimation.
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •2•0•0•0•Updated Jul 1, 2024Jul 1, 2024

    • PF_Estimation

      Public
      Jupyter Notebook
      •1•0•0•0•Updated Oct 24, 2023Oct 24, 2023

    • iMATterMobile

      Public
      TypeScript
      •1•0•0•8•Updated Aug 22, 2023Aug 22, 2023

    • Visualization

      Public
      A Joint JS Visualization tool that takes in the Standardized differential equations and generates a visual output for the user to verify their model.
      JavaScript
      •0•0•0•0•Updated Apr 18, 2023Apr 18, 2023

    • iMATterWeb

      Public
      Codebase for webapp half of the iMatter product
      TypeScript
      •1•0•0•21•Updated Mar 3, 2023Mar 3, 2023

    • cpcesu-summit

      Public
      JavaScript
      •0•0•0•0•Updated Sep 1, 2022Sep 1, 2022

    • SPARSEMODr

      Public
      C++
      •0•1•0•0•Updated Jul 19, 2022Jul 19, 2022
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