Repositories list

• Altar

  Public
  Altar is a set of tools to manage experimental data using Sacred

  Python

  •

  GNU General Public License v3.0

  •33 forks in DreamRepo/Altar•66 stars in DreamRepo/Altar•44 issues in DreamRepo/Altar•00 pull requests in DreamRepo/Altar•Updated Mar 18, 2026Mar 18, 2026

• OJIP-fit

  Public
  Analysis of OJIP curves of photosynthetic species to calibrate light intensity

  Python

  •

  GNU General Public License v3.0

  •11 fork in DreamRepo/OJIP-fit•00 stars in DreamRepo/OJIP-fit•00 issues in DreamRepo/OJIP-fit•00 pull requests in DreamRepo/OJIP-fit•Updated Mar 16, 2026Mar 16, 2026

• AltarSender

  Public
  Python GUI application for sending experiment results to Sacred/MongoDB databases. Supports metadata, metrics, artifacts, and large file uploads to MinIO or fil…

  Python

  •00 forks in DreamRepo/AltarSender•22 stars in DreamRepo/AltarSender•00 issues in DreamRepo/AltarSender•00 pull requests in DreamRepo/AltarSender•Updated Feb 10, 2026Feb 10, 2026

• AltarExtractor

  Public
  Dash web app for browsing Sacred ML experiments stored in MongoDB. Filter runs by config, visualize metrics, and export data as CSV or explore with Pygwalker.

  Python

  •00 forks in DreamRepo/AltarExtractor•11 star in DreamRepo/AltarExtractor•00 issues in DreamRepo/AltarExtractor•00 pull requests in DreamRepo/AltarExtractor•Updated Feb 10, 2026Feb 10, 2026

• AltarDocker

  Public
  Docker Compose stack for running Sacred experiment tracking infrastructure locally. Includes MongoDB, MinIO (S3-compatible storage), Omniboard dashboard, and Al…

  Shell

  •00 forks in DreamRepo/AltarDocker•11 star in DreamRepo/AltarDocker•00 issues in DreamRepo/AltarDocker•00 pull requests in DreamRepo/AltarDocker•Updated Feb 10, 2026Feb 10, 2026

• AltarViewer

  Public
  Visualise database content (Sacred + MongoDB)

  Python

  •

  GNU General Public License v3.0

  •11 fork in DreamRepo/AltarViewer•11 star in DreamRepo/AltarViewer•00 issues in DreamRepo/AltarViewer•11 pull request in DreamRepo/AltarViewer•Updated Jan 28, 2026Jan 28, 2026

• DreamDataManagement

  Public
  A repository of small tools and deployment configs to manage experiment data end‑to‑end.

  HTML

  •

  GNU General Public License v3.0

  •00 forks in DreamRepo/DreamDataManagement•00 stars in DreamRepo/DreamDataManagement•00 issues in DreamRepo/DreamDataManagement•00 pull requests in DreamRepo/DreamDataManagement•Updated Dec 10, 2025Dec 10, 2025

• SacredDatasetExtractor

  Public
  A web tool in Python Dash to display data and extract datasets from a Sacred database

  Python

  •00 forks in DreamRepo/SacredDatasetExtractor•00 stars in DreamRepo/SacredDatasetExtractor•00 issues in DreamRepo/SacredDatasetExtractor•00 pull requests in DreamRepo/SacredDatasetExtractor•Updated Dec 4, 2025Dec 4, 2025

• ExperimentSenderSacred

  Public
  A Python CustomTkinter GUI tool to send experiments to Sacred easily

  Python

  •00 forks in DreamRepo/ExperimentSenderSacred•00 stars in DreamRepo/ExperimentSenderSacred•00 issues in DreamRepo/ExperimentSenderSacred•00 pull requests in DreamRepo/ExperimentSenderSacred•Updated Oct 13, 2025Oct 13, 2025

• DataManagementToolDocker

  Public
  Tool for experiment data management deployment

  Shell

  •00 forks in DreamRepo/DataManagementToolDocker•00 stars in DreamRepo/DataManagementToolDocker•00 issues in DreamRepo/DataManagementToolDocker•00 pull requests in DreamRepo/DataManagementToolDocker•Updated Sep 25, 2025Sep 25, 2025

• workshop_data

  Public
  Multiuser access to MongoDB, moniboard and data handling with Jupyter

  Batchfile

  •

  GNU General Public License v3.0

  •00 forks in DreamRepo/workshop_data•00 stars in DreamRepo/workshop_data•00 issues in DreamRepo/workshop_data•00 pull requests in DreamRepo/workshop_data•Updated Aug 22, 2025Aug 22, 2025

• DreamTIFFReader

  Public
  A tool to read TIFF files either from minio or local storage

  Python

  •00 forks in DreamRepo/DreamTIFFReader•11 star in DreamRepo/DreamTIFFReader•00 issues in DreamRepo/DreamTIFFReader•00 pull requests in DreamRepo/DreamTIFFReader•Updated Aug 8, 2025Aug 8, 2025

• ControlCamera

  Public
  Control cameras with Python using micromanager protocols

  Python

  •

  GNU General Public License v3.0

  •11 fork in DreamRepo/ControlCamera•00 stars in DreamRepo/ControlCamera•00 issues in DreamRepo/ControlCamera•00 pull requests in DreamRepo/ControlCamera•Updated Jun 27, 2025Jun 27, 2025

• ControlMotors

  Public
  This repository explains how to turn a manual microscope stage into a motorized one.

  G-code

  •

  GNU General Public License v3.0

  •55 forks in DreamRepo/ControlMotors•00 stars in DreamRepo/ControlMotors•00 issues in DreamRepo/ControlMotors•00 pull requests in DreamRepo/ControlMotors•Updated Jun 26, 2025Jun 26, 2025

• ControlLight

  Public
  A package allowing to generate train of pulses with an Arduino from Python

  C++

  •

  GNU General Public License v3.0

  •11 fork in DreamRepo/ControlLight•00 stars in DreamRepo/ControlLight•00 issues in DreamRepo/ControlLight•00 pull requests in DreamRepo/ControlLight•Updated Jun 26, 2025Jun 26, 2025

• NPQScore-data

  Public
  Jupyter Notebook

  •11 fork in DreamRepo/NPQScore-data•00 stars in DreamRepo/NPQScore-data•00 issues in DreamRepo/NPQScore-data•00 pull requests in DreamRepo/NPQScore-data•Updated Jan 6, 2025Jan 6, 2025

• light_calibration

  Public
  Video analysis of light calibration experiment (Dronpa2)

  Jupyter Notebook

  •

  GNU General Public License v3.0

  •22 forks in DreamRepo/light_calibration•11 star in DreamRepo/light_calibration•00 issues in DreamRepo/light_calibration•00 pull requests in DreamRepo/light_calibration•Updated Nov 22, 2023Nov 22, 2023