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    • Tool for building and manipulating Markov models of ion-channel kinetics
      Python
      2511Updated Dec 18, 2025Dec 18, 2025
    • Python
      2110Updated Dec 18, 2025Dec 18, 2025
    • Code for optimal experimental design paper
      Python
      0000Updated Dec 16, 2025Dec 16, 2025
    • Using limit cycle continuation methods to speed up evaluation of ion channel cell models
      Julia
      0100Updated Nov 24, 2025Nov 24, 2025
    • A Python package to run Lei et al. (2019) quality control on patch-clamp time-series data.
      Python
      13211Updated Nov 20, 2025Nov 20, 2025
    • An investigation of rundown in automated patch clamp L-type calcium current
      Jupyter Notebook
      0100Updated Oct 28, 2025Oct 28, 2025
    • A Python package to export SynroPatch 384 data.
      Python
      03210Updated Oct 17, 2025Oct 17, 2025
    • Summer school 2025 notebooks, for use in Google Colab
      Jupyter Notebook
      0000Updated Oct 9, 2025Oct 9, 2025
    • Phase-voltage space filling optimal designs in Matlab
      MATLAB
      0200Updated Sep 19, 2025Sep 19, 2025
    • Data and figures for "Variability in reported midpoints of (in)activation for cardiac INa"
      Python
      0100Updated Sep 3, 2025Sep 3, 2025
    • Code to add a mathematical model of voltage-clamp artefacts to your ion channel simulations
      Python
      0400Updated Aug 31, 2025Aug 31, 2025
    • Voltage clamp protocol design for hERG.
      Python
      0000Updated Jul 10, 2025Jul 10, 2025
    • Code to compare four different ways to fit an ion current model
      Python
      3410Updated Jul 9, 2025Jul 9, 2025
    • ionBench

      Public
      A benchmarking tool for comparing different parameter optimization algorithms for ion channel models
      Python
      1400Updated Jun 27, 2025Jun 27, 2025
    • BenNevis

      Public
      "Where is Ben Nevis" presents the landscape of Great Britain as a testbed for optimisation and sampling methods.
      Python
      1450Updated Apr 23, 2025Apr 23, 2025
    • Code to reproduce the figures and results from "Comparison of in silico predictions of action potential duration in response to inhibition of IKr and ICaL with new human ex-vivo recordings"
      Jupyter Notebook
      0100Updated Apr 13, 2025Apr 13, 2025
    • Code for reproducing "Resolving artefacts in voltage-clamp experiments with computational modelling: an application to fast sodium current recordings"
      Jupyter Notebook
      0100Updated Apr 11, 2025Apr 11, 2025
    • Python
      0000Updated Apr 3, 2025Apr 3, 2025
    • Examples of parameter estimation in cardiac cell electrophysiology using Myokit and PINTS.
      Jupyter Notebook
      6462Updated Feb 20, 2025Feb 20, 2025
    • A repository to reproduce modelling results for the R56Q-hERG project
      Python
      0100Updated Feb 13, 2025Feb 13, 2025
    • Jupyter Notebook
      0000Updated Nov 19, 2024Nov 19, 2024
    • Code to replicate the analyses from the article "Parameter inference for stochastic reaction models of ion channel gating from whole-cell voltage-clamp data"
      R
      0000Updated Nov 18, 2024Nov 18, 2024
    • Jupyter Notebook
      0010Updated Oct 9, 2024Oct 9, 2024
    • JavaScript
      2291Updated Sep 25, 2024Sep 25, 2024
    • ap-nimbus

      Public
      Cardiac modelling in containers
      2150Updated Sep 10, 2024Sep 10, 2024
    • API for cloudified AP Predict
      JavaScript
      0100Updated Sep 10, 2024Sep 10, 2024
    • Shell
      0110Updated Sep 10, 2024Sep 10, 2024
    • Relative contributions of transmembrane currents in human AP models
      Python
      0030Updated Sep 5, 2024Sep 5, 2024
    • Python
      3000Updated Jun 14, 2024Jun 14, 2024
    • Code for model reduction using manifold boundaries
      Python
      0040Updated Feb 23, 2024Feb 23, 2024