Skip to content

@CAVEconnectome CAVE

Change the repository type filter

All

    Repositories list

    33 repositories

    • PyChunkedGraph

      Public
      Data backend for fast proofreading of cell segmentations in connectomics datasets
      Python
      •
      Mozilla Public License 2.0
      •11•24•18•15•Updated Aug 3, 2025Aug 3, 2025

    • SkeletonService

      Public
      Skeleton querying and retrieval service
      Python
      •
      MIT License
      •1•0•1•1•Updated Jul 31, 2025Jul 31, 2025

    • MaterializationEngine

      Public
      Python
      •
      MIT License
      •3•0•12•9•Updated Jul 30, 2025Jul 30, 2025

    • CAVEdeployment

      Public
      Shell
      •
      MIT License
      •6•2•12•3•Updated Jul 30, 2025Jul 30, 2025

    • AnnotationEngine

      Public
      A flask app rest interface for adding annotations to a cloud volume segmentation
      Python
      •
      MIT License
      •1•3•8•6•Updated Jul 29, 2025Jul 29, 2025

    • EMAnnotationSchemas

      Public
      Repository to hold schemas for annotations of volumetric imaging data focused on EM
      Python
      •
      MIT License
      •11•5•0•5•Updated Jul 29, 2025Jul 29, 2025

    • CAVEclient

      Public
      This is the python client for accessing REST APIs within the Connectome Annotation Versioning Engine.
      connectomics
      Python
      •
      MIT License
      •13•30•31•8•Updated Jul 29, 2025Jul 29, 2025

    • DynamicAnnotationDB

      Public
      Python
      •
      MIT License
      •1•1•0•4•Updated Jul 23, 2025Jul 23, 2025

    • nglui

      Public
      Python
      •
      MIT License
      •4•12•8•0•Updated Jul 12, 2025Jul 12, 2025

    • MeshParty

      Public
      visualizationanalysis
      Python
      •
      Apache License 2.0
      •17•36•18•6•Updated Jul 10, 2025Jul 10, 2025

    • middle_auth_client

      Public
      Python
      •
      MIT License
      •1•0•1•1•Updated Jul 9, 2025Jul 9, 2025

    • uwsgi_prometheus_workers

      Public
      A simple python application to convert uwsgi stats to a prometheus metric for scaling
      Python
      •
      MIT License
      •0•0•0•0•Updated Jul 4, 2025Jul 4, 2025

    • Tourguide

      Public
      Python
      •1•3•0•0•Updated Jun 26, 2025Jun 26, 2025

    • middle_auth

      Public
      Python
      •
      MIT License
      •0•0•0•6•Updated Apr 30, 2025Apr 30, 2025

    • dash_on_flask

      Public
      Dash on Flask with login_required (and application factory pattern)
      Python
      •
      MIT License
      •125•0•0•0•Updated Apr 16, 2025Apr 16, 2025

    • dash-connectivity-viewer

      Public
      visualizationanalysis
      Python
      •
      Other
      •1•0•0•1•Updated Apr 16, 2025Apr 16, 2025

    • pcg_skel

      Public
      Robust skeletonization of PyChunkedGraph-backed objects
      analysis
      Python
      •
      MIT License
      •3•7•0•2•Updated Apr 14, 2025Apr 14, 2025

    • AnnotationFrameworkInfoService

      Public
      Python
      •
      MIT License
      •0•1•1•4•Updated Apr 7, 2025Apr 7, 2025

    • AnalysisExamples

      Public
      A collaborative repo to host small analyses using CAVE that may be informative or useful more broadly
      BSD 3-Clause "New" or "Revised" License
      •0•1•0•0•Updated Feb 28, 2025Feb 28, 2025

    • terraform-google-cave

      Public
      A repository to store terraform modules for setting up infrastructure as code for CAVE in google cloud
      HCL
      •
      MIT License
      •0•0•0•0•Updated Jan 29, 2025Jan 29, 2025

    • cave-helm-charts

      Public
      repository to store helm charts for deploying CAVE services to kubernetes
      Smarty
      •
      MIT License
      •0•0•0•0•Updated Jan 23, 2025Jan 23, 2025

    • NeuroglancerJsonServer

      Public
      NeuroglancerJsonServer
      Python
      •
      MIT License
      •2•0•1•0•Updated Oct 1, 2024Oct 1, 2024

    • datastore-flex

      Public
      Datastore with objects support
      Python
      •
      MIT License
      •0•1•0•0•Updated Sep 26, 2024Sep 26, 2024

    • PCGL2Cache

      Public
      Level 2 caching system for the PyChunkedGraph
      Python
      •
      GNU General Public License v3.0
      •2•0•2•0•Updated Aug 31, 2024Aug 31, 2024

    • CAVEnvq

      Public
      Integration of CAVE system and NeuvueQueue task management
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •0•0•0•0•Updated Aug 29, 2024Aug 29, 2024

    • CAVEpaper

      Public
      Jupyter Notebook
      •
      MIT License
      •0•1•0•0•Updated Aug 12, 2024Aug 12, 2024

    • .github

      Public
      2•0•0•0•Updated Aug 12, 2024Aug 12, 2024

    • sqlcsv_transform

      Public
      MIT License
      •0•0•0•0•Updated Jul 29, 2024Jul 29, 2024

    • LargeLookupUtils

      Public
      Python
      •0•0•0•0•Updated May 8, 2024May 8, 2024

    • ImageryClient

      Public
      Publication-ready visualization of overlays of imagery and segmentation from cloudvolume data
      visualization
      Python
      •
      MIT License
      •2•9•2•0•Updated Apr 15, 2024Apr 15, 2024