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@AshleyLab Ashley Lab

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    26 repositories

    • vesper

      Public
      Jupyter Notebook
      •
      MIT License
      •0•0•0•10•Updated Mar 30, 2026Mar 30, 2026

    • MARCUS

      Public
      Python
      •
      Other
      •4•14•0•1•Updated Mar 20, 2026Mar 20, 2026

    • minigene_pipeline

      Public
      Python
      •
      Apache License 2.0
      •0•0•0•9•Updated Mar 9, 2026Mar 9, 2026

    • .github

      Public
      AshleyLab/.github is a special repository used to store the public org README
      0•0•0•0•Updated Feb 22, 2026Feb 22, 2026

    • mhc_activity_recommender

      Public
      recommender system of activities for users in MHC 3.0 coaching studies
      Python
      •1•1•1•0•Updated Jun 22, 2022Jun 22, 2022

    • lvh-fusion

      Public
      Python
      •
      MIT License
      •3•5•0•0•Updated Mar 22, 2022Mar 22, 2022

    • myheartcounts

      Public
      A collection of utilities, analytics for mobile health data
      Jupyter Notebook
      •2•9•3•0•Updated Feb 28, 2021Feb 28, 2021

    • mhc_data_parsers

      Public
      data parsers for MyHeartCounts coreMotion, HealthKit, XML exports
      Python
      •0•0•0•0•Updated Aug 16, 2020Aug 16, 2020

    • deepbeat

      Public
      DeepBeat: Multi-task deep learning for cardiac rhythm detection in wearable devices
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •10•30•3•0•Updated May 26, 2020May 26, 2020

    • risk_scores

      Public
      LD Pred risk scores for afib
      Jupyter Notebook
      •0•0•14•0•Updated Mar 8, 2020Mar 8, 2020

    • metal

      Public
      Metal meta indel caller.
      Python
      •0•0•0•0•Updated Nov 26, 2019Nov 26, 2019

    • scotch

      Public
      Scotch pipeline for indel calling.
      Python
      •2•10•2•0•Updated Nov 25, 2019Nov 25, 2019

    • scotch-data-grch37

      Public
      GRCh37 region feature data from Scotch indel caller.
      0•0•0•0•Updated Nov 25, 2019Nov 25, 2019

    • scotch-data-grch38

      Public
      GRCh38 region feature data for Scotch indel caller.
      1•0•0•0•Updated Nov 25, 2019Nov 25, 2019

    • CMSSupport

      Public
      Drop-in Bridge-compatible CMS encryption implementation for use with AppCore.
      Objective-C
      •
      Other
      •11•0•0•0•Updated Nov 19, 2019Nov 19, 2019

    • MHC-Gait-Cluster

      Public
      MHC Gait work on the Sherlock Cluster
      Jupyter Notebook
      •2•1•0•0•Updated Aug 7, 2018Aug 7, 2018

    • map_plots

      Public
      plotting maps in R
      R
      •0•1•0•0•Updated Jul 13, 2018Jul 13, 2018

    • stmpVisualization2.0

      Public
      Actual web based stmp visualization (runs in javascript)
      JavaScript
      •
      MIT License
      •0•1•0•0•Updated Mar 8, 2018Mar 8, 2018

    • RRest

      Public
      Algorithms for estimation of respiratory rate from physiological signals
      MATLAB
      •
      Other
      •60•0•0•0•Updated Feb 20, 2018Feb 20, 2018

    • stmp4

      Public
      Charlie continues Noah's stmp3.
      Python
      •0•0•0•0•Updated Jan 15, 2018Jan 15, 2018

    • stmp3

      Public
      A third, more modest but less broken version of stmp
      Python
      •0•1•0•0•Updated Dec 13, 2017Dec 13, 2017

    • charlie-cnvkit

      Public
      scripts for running CNVkit in the UDN
      Shell
      •0•0•0•0•Updated Aug 17, 2017Aug 17, 2017

    • keras

      Public
      Theano-based Deep Learning library (convnets, recurrent neural networks, and more).
      Python
      •
      Other
      •20k•0•0•0•Updated Aug 2, 2017Aug 2, 2017

    • stmpVisualization

      Public
      visualization of stmp data and workflow aid
      Processing
      •0•0•0•0•Updated Jul 24, 2017Jul 24, 2017

    • device_validation

      Public
      Device validation study analysis code
      HTML
      •0•0•0•0•Updated Jun 5, 2017Jun 5, 2017

    • stmp

      Public
      Sequence to Medical Phenotypes: A pipeline featuring variant annotation, prioritization, pharmacogenomics, and tools for analyzing genomic trios (mother, father…
      Python
      •3•13•1•0•Updated Mar 1, 2016Mar 1, 2016
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