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@AdaptInfer Adaptive Inference Lab

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    19 repositories

    • website

      Public
      Our website
      HTML
      •
      MIT License
      •5•1•0•0•Updated Jun 6, 2026Jun 6, 2026

    • CompBioDatasetsForMachineLearning

      Public
      A Curated List of Computational Biology Datasets Suitable for Machine Learning
      machine-learningcomputational-biologydataset
      machine-learningcomputational-biologydatasetcurated-listdatasetsbiomedical-data-sciencecomputational-biology-datasets
      28•200•0•0•Updated May 30, 2026May 30, 2026

    • context-review

      Public
      Context-Adaptive Inference: A Unified Statistical and Foundation-Model View
      HTML
      •
      Creative Commons Attribution 4.0 International
      •13•13•0•0•Updated May 22, 2026May 22, 2026

    • fm-survey

      Public
      Foundation Models for Biomedical Data: Architectures, Adaptation, and Opportunities for Scientific Discovery
      HTML
      •
      Creative Commons Attribution 4.0 International
      •5•0•0•1•Updated May 4, 2026May 4, 2026

    • Contextualized

      Public
      An SKLearn-style toolbox for estimating and analyzing models, distributions, and functions with context-specific parameters.
      machine-learningbioinformaticsstatistics
      machine-learningbioinformaticsstatisticsmedical-informatics
      Python
      •
      GNU General Public License v3.0
      •13•77•35•4•Updated Mar 6, 2026Mar 6, 2026

    • .github

      Public
      0•0•0•0•Updated Jan 13, 2026Jan 13, 2026

    • dgm-fall-2025

      Public
      JavaScript
      •
      MIT License
      •55•0•0•0•Updated Dec 17, 2025Dec 17, 2025

    • ReadingList

      Public
      Our reading list
      1•2•0•0•Updated Oct 4, 2025Oct 4, 2025

    • pgm-spring-2025

      Public
      Course webpage for PGMs, Spring 2025
      modelsgraphicalprobabilistic
      modelsgraphicalprobabilistic
      TeX
      •
      MIT License
      •103•1•0•1•Updated Jun 6, 2025Jun 6, 2025

    • easy-gpt

      Public
      A teaching introduction to GPT
      Python
      •1•2•0•0•Updated Apr 15, 2025Apr 15, 2025

    • ConferenceCountdown

      Public
      Webpage used to countdown time until ML/Compbio conference deadlines
      JavaScript
      •
      MIT License
      •0•6•0•0•Updated Jan 14, 2025Jan 14, 2025

    • clehrity

      Public
      Automatically finding surprises in EHRs
      Python
      •
      MIT License
      •0•8•0•19•Updated Aug 21, 2024Aug 21, 2024

    • website_utils

      Public
      Utilities for making a website
      Python
      •
      MIT License
      •0•2•0•0•Updated Jun 13, 2024Jun 13, 2024

    • ebm_utils

      Public
      Utilities for Explainable Boosting Machines
      Python
      •
      MIT License
      •2•3•1•0•Updated Nov 30, 2023Nov 30, 2023

    • ClinicalMLZoo

      Public
      A zoo of publicly available ML models for clinical tasks.
      MIT License
      •0•0•0•0•Updated Sep 20, 2023Sep 20, 2023

    • DeathByRoundNumbers

      Public
      Glass-box ML reveals biases in medical practice at round number thresholds
      ehrinterpretable-machine-learning
      ehrinterpretable-machine-learning
      Jupyter Notebook
      •
      MIT License
      •1•3•0•0•Updated Feb 23, 2023Feb 23, 2023

    • gam_purification

      Public
      Utilities for Purifying Generalized Additive Models
      Python
      •
      MIT License
      •1•3•1•0•Updated Nov 5, 2022Nov 5, 2022

    • Dropout_Interactions

      Public
      Code for "Dropout as a Regularizer of Interaction Effects"
      Jupyter Notebook
      •0•1•0•0•Updated Apr 23, 2022Apr 23, 2022

    • GO_Translator

      Public
      Simple utility functions for handling GO Terms in Python.
      gene-ontology
      gene-ontology
      Python
      •
      MIT License
      •0•2•0•0•Updated Jul 7, 2019Jul 7, 2019
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