Stop Ignoring Ruff Linting

[ktactac]

Description of work:

Removes catch-all ruff lint rule ignoring from pyproject.toml and either fixes each case, or adds an in-line noqa in cases where external scripts may be impacted.

Check all that apply:

• updated documentation
• Source added/refactored
• Added unit tests
• Added integration tests
• Verified that tests requiring the /SNS and /HFIR filesystems pass without fail

References:

• Links to IBM EWM items: 15134: [lr_reduction] Fix ignored linting rules
• Links to related issues or pull requests:

⚠️ Manual test for the reviewer

(Instructions for testing here)

Check list for the reviewer

• best software practices
  • clearly named variables (better to be verbose in variable names)
  • code comments explaining the intent of code blocks
• All the tests are passing
• The documentation is up to date
• code comments added when explaining intent

[codecov-commenter]

Codecov Report

❌ Patch coverage is 81.69935% with 28 lines in your changes missing coverage. Please review.
✅ Project coverage is 85.16%. Comparing base (d4c6005) to head (310464e).

Files with missing lines	Patch %	Lines
src/lr_reduction/time_resolved.py	70.58%	10 Missing ⚠️
src/lr_reduction/utils.py	0.00%	6 Missing ⚠️
src/lr_reduction/web_report.py	50.00%	5 Missing ⚠️
src/lr_reduction/event_reduction.py	90.62%	3 Missing ⚠️
src/lr_reduction/template.py	50.00%	2 Missing ⚠️
...c/lr_reduction/scaling_factors/LRScalingFactors.py	75.00%	1 Missing ⚠️
src/lr_reduction/workflow.py	0.00%	1 Missing ⚠️

Additional details and impacted files

@@           Coverage Diff           @@
##             next     #119   +/-   ##
=======================================
  Coverage   85.16%   85.16%           
=======================================
  Files          23       23           
  Lines        2925     2925           
=======================================
  Hits         2491     2491           
  Misses        434      434           

☔ View full report in Codecov by Sentry.
📢 Have feedback on the report? Share it here.

🚀 New features to boost your workflow:

• ❄️ Test Analytics: Detect flaky tests, report on failures, and find test suite problems.