This update introduces tractography via DTI, DKI, and FBI ODFs to parse into MRtrix3's tckgen. Additionally, .fib files are also created for tractography through DSI Studio.
PyDesigner is now also published on PyPI for easy installation. Simple type pip install PyDesigner-DWI for easy installation. It is no longer a requirement to download this repository and manually installing PyDesigner.
Added
- Tractography modules
tractography.dsistudio,tractography.odf,
tractography.sphericalsampling - ODF computations and spherical harmonic expansion for DTI and DKI
- Option to add user-defined map for tractography stopping criteria
- Added option to import multiple custom maps into DSI studio file
- PyDesigner can now be pulled from PyPI with
pip install PyDesigner-DWI
Changed
- Fixed a logic in multi-TE detection algorithm that prevented certain
datasets from processing - Overhauled how inputs paths are entered. Paths to input DWIs can now
be provided to PyDesigner without comma separation - Udpate
des2dke.mfor compatibility with nii_preprocess - Replaced FBI SH with tesseral SH
Removed
- None