Several updates to how research papers are presented

_config.yml

@@ -346,7 +346,6 @@ defaults:
       toc: true
       sidebar:
         nav: "research"
-
   # _dsa
   - scope:
       path: ""

_plugins/bibtex_tag.rb

@@ -1,4 +1,4 @@
-# _plugins/paper_tag.rb
+# _plugins/bibtex_tag.rb
 module Jekyll
   class BibtexTag < Liquid::Block
     def initialize(tag_name, image_url, tokens)
@@ -17,11 +17,17 @@ def render(context)
           <div class="bibtex-image">
             <img src="#{@image_url}" alt="Paper thumbnail">
           </div>
-          <div class="bibtex-details">
-            <p></p>
-          </div>
-          <div class="bibtex-data">
-            #{text}
+          <div class="bibtex-contents">
+            <div class="paper-title"></div>
+            <div class="paper-authors"></div>
+            <div class="paper-journal"></div>
+            <div class="bibtex-buttons">
+              <a href="#" class="btn btn--bibtex btn--journal">Journal</a>
+              <a href="#" class="btn btn--bibtex btn--arxiv">arXiv</a>
+            </div>
+            <div class="bibtex-data">
+              #{text}
+            </div>
           </div>
         </div>
       HTML

_research/publications.md

@@ -1,11 +1,38 @@
 ---
 title: Publications
 permalink: /research/publications/
+classes: wide
 toc: false
 bibtex: true
 ---
 
-# Peer-Reviewed
+# 2024
+{% bibtex /assets/images/papers/2024_pierre-jacques.png %}
+@article{Jacques:2024pxh,
+    author = "Jacques, Terrence Pierre and Cupp, Samuel and Werneck, Leonardo R. and Tootle, Samuel D. and Hamilton, Maria C. Babiuc and Etienne, Zachariah B.",
+    title = "{GRoovy: A General Relativistic Hydrodynamics Code for Dynamical Spacetimes with Curvilinear Coordinates, Tabulated Equations of State, and Neutrino Physics}",
+    eprint = "2412.03659",
+    archivePrefix = "arXiv",
+    primaryClass = "gr-qc",
+    month = "12",
+    year = "2024",
+    misc = "Submitted to Phys. Rev. D"
+}
+{% endbibtex %}
+
+{% bibtex /assets/images/papers/2024_duez.png %}
+@article{Duez:2024ujs,
+    author = "Duez, Matthew D. and Cadenhead, Courtney L. and Etienne, Zachariah B. and Kelly, Bernard and Werneck, Leonardo R.",
+    title = "{Toward 2D Dynamo Models Calibrated by Global 3D Relativistic Accretion Disk Simulations}",
+    eprint = "2409.02899",
+    archivePrefix = "arXiv",
+    primaryClass = "astro-ph.HE",
+    month = "9",
+    year = "2024",
+    misc = "Submitted to Phys. Rev. D"
+}
+{% endbibtex %}
+
 {% bibtex /assets/images/papers/2024_zenati.png %}
 @article{Zenati:2024pgn,
     author = "Zenati, Yossef and Krolik, Julian H. and Werneck, Leonardo R. and Etienne, Zachariah B. and Noble, Scott C. and Murguia-Berthier, Ariadna and Schnittman, Jeremy D.",
@@ -39,6 +66,7 @@ bibtex: true
 }
 {% endbibtex %}
 
+# 2023
 {% bibtex /assets/images/papers/2023_zenati.png %}
 @article{Zenati:2023lwh,
     author = "Zenati, Yossef and Krolik, Julian H. and Werneck, Leonardo R. and Murguia-Berthier, Ariadna and Etienne, Zachariah B. and Noble, Scott C. and Piran, Tsvi",
@@ -55,9 +83,9 @@ bibtex: true
 }
 {% endbibtex %}
 
-{% bibtex /assets/images/papers/2022_werneck.png %}
+{% bibtex /assets/images/papers/2023_werneck.png %}
 @article{Werneck:2022exo,
-    author = "Werneck, Leonardo R. and others",
+    author = "Werneck, Leonardo R. and Etienne, Zachariah B. and Murguia-Berthier, Ariadna and Haas, Roland and Cipolletta, Federico and others",
     title = "{Addition of tabulated equation of state and neutrino leakage support to illinoisgrmhd}",
     eprint = "2208.14487",
     archivePrefix = "arXiv",
@@ -71,7 +99,8 @@ bibtex: true
 }
 {% endbibtex %}
 
-{% bibtex /assets/images/papers/2021_armengol.png %}
+# 2022
+{% bibtex /assets/images/papers/2022_armengol.png %}
 @article{Armengol:2021mbt,
     author = "Armengol, Federico G. Lopez and Etienne, Zachariah B. and Noble, Scott C. and Kelly, Bernard J. and Werneck, Leonardo R. and others",
     title = "{Handing off the outcome of binary neutron star mergers for accurate and long-term postmerger simulations}",
@@ -87,7 +116,7 @@ bibtex: true
 }
 {% endbibtex %}
 
-{% bibtex /assets/images/papers/2021_assumpcao.png %}
+{% bibtex /assets/images/papers/2022_assumpcao.png %}
 @article{Assumpcao:2021fhq,
     author = "Assumpcao, Thiago and Werneck, Leonardo R. and Jacques, Terrence Pierre and Etienne, Zachariah B.",
     title = "{Fast hyperbolic relaxation elliptic solver for numerical relativity: Conformally flat, binary puncture initial data}",
@@ -103,6 +132,7 @@ bibtex: true
 }
 {% endbibtex %}
 
+# 2021
 {% bibtex /assets/images/papers/2021_werneck.png %}
 @article{Werneck:2021kch,
     author = "Werneck, Leonardo R. and Etienne, Zachariah B. and Abdalla, Elcio and Cuadros-Melgar, Bertha and Pellicer, C. E.",
@@ -135,30 +165,3 @@ bibtex: true
 }
 {% endbibtex %}
 
-# Preprints
-
-{% bibtex /assets/images/papers/2024_pierre-jacques.png %}
-@article{Jacques:2024pxh,
-    author = "Jacques, Terrence Pierre and Cupp, Samuel and Werneck, Leonardo R. and Tootle, Samuel D. and Hamilton, Maria C. Babiuc and Etienne, Zachariah B.",
-    title = "{GRoovy: A General Relativistic Hydrodynamics Code for Dynamical Spacetimes with Curvilinear Coordinates, Tabulated Equations of State, and Neutrino Physics}",
-    eprint = "2412.03659",
-    archivePrefix = "arXiv",
-    primaryClass = "gr-qc",
-    month = "12",
-    year = "2024",
-    misc = "Submitted to Phys. Rev. D"
-}
-{% endbibtex %}
-
-{% bibtex /assets/images/papers/2024_duez.png %}
-@article{Duez:2024ujs,
-    author = "Duez, Matthew D. and Cadenhead, Courtney L. and Etienne, Zachariah B. and Kelly, Bernard and Werneck, Leonardo R.",
-    title = "{Toward 2D Dynamo Models Calibrated by Global 3D Relativistic Accretion Disk Simulations}",
-    eprint = "2409.02899",
-    archivePrefix = "arXiv",
-    primaryClass = "astro-ph.HE",
-    month = "9",
-    year = "2024",
-    misc = "Submitted to Phys. Rev. D"
-}
-{% endbibtex %}

_sass/minimal-mistakes/_base.scss

@@ -27,7 +27,7 @@ h3,
 h4,
 h5,
 h6 {
-  margin: 2em 0 0.5em;
+  margin: 0em 0 0.5em;
   line-height: 1.2;
   font-family: $header-font-family;
   font-weight: bold;

_sass/minimal-mistakes/_buttons.scss

@@ -39,7 +39,10 @@
   (info, $info-color),
   (facebook, $facebook-color),
   (twitter, $twitter-color),
-  (linkedin, $linkedin-color);
+  (linkedin, $linkedin-color),
+  (journal, $facebook-color),
+  (arxiv, $danger-color),
+  (pdf, $lighter-gray);
 
   @each $buttoncolor, $color in $buttoncolors {
     &--#{$buttoncolor} {
@@ -94,4 +97,9 @@
   &--small {
     font-size: $type-size-7;
   }
+
+  /* bibtex buttons */
+  &--bibtex {
+    padding: 0em 0.5em;
+  }
 }

_sass/minimal-mistakes/_page.scss

@@ -562,7 +562,8 @@ body {
     }
 
     @include breakpoint($x-large) {
-      padding-inline-end: 0;
+      width: calc(100% - #{$right-sidebar-width-narrow});
+      padding-inline-end: 50px;
     }
   }
 }

_sass/minimal-mistakes/_sidebar.scss

@@ -325,25 +325,37 @@
    Wide Pages
    ========================================================================== */
 
-.wide .sidebar__right {
-  margin-bottom: 1em;
+.wide {
+  .sidebar__right {
+    margin-bottom: 1em;
 
-  @include breakpoint($large) {
-    position: initial;
-    top: initial;
-    inset-inline-end: initial;
-    width: initial;
-    margin-inline-end: initial;
-    padding-inline-start: initial;
-    z-index: initial;
+    @include breakpoint($large) {
+      position: initial;
+      top: initial;
+      inset-inline-end: initial;
+      width: initial;
+      margin-inline-end: initial;
+      padding-inline-start: initial;
+      z-index: initial;
+
+      &.sticky {
+        float: none;
+      }
+    }
 
-    &.sticky {
-      float: none;
+    @include breakpoint($x-large) {
+      width: initial;
+      margin-inline-end: initial;
     }
   }
 
-  @include breakpoint($x-large) {
-    width: initial;
-    margin-inline-end: initial;
+  .sidebar {
+    @include breakpoint($large) {
+      width: calc(#{$right-sidebar-width-narrow} - 1em);
+    }
+
+    @include breakpoint($x-large) {
+      width: calc(#{$right-sidebar-width-narrow} - 1em);
+    }
   }
 }

_sass/minimal-mistakes/_variables.scss

@@ -61,15 +61,15 @@ $h-size-6: 1em !default; // ~16px
 $gray: #7a8288 !default;
 $dark-gray: mix(#000, $gray, 50%) !default;
 $darker-gray: mix(#000, $gray, 60%) !default;
-$light-gray: mix(#fff, $gray, 50%) !default;
+$light-gray: #aaa !default;
 $lighter-gray: mix(#fff, $gray, 90%) !default;
 
 $background-color: #fff !default;
 $code-background-color: #fafafa !default;
 $code-background-color-dark: $light-gray !default;
 $text-color: $dark-gray !default;
 $muted-text-color: mix(#fff, $text-color, 20%) !default;
-$border-color: $lighter-gray !default;
+$border-color: $light-gray !default;
 $form-background-color: $lighter-gray !default;
 $footer-background-color: $lighter-gray !default;
 

assets/css/bibtex.css

@@ -1,26 +1,47 @@
 .bibtex-entry {
     display: flex;
-    align-items: center;
-    margin-bottom: 20px;
-    max-width: 800px;
+    gap: 20px;
+    margin-bottom: 30px;
+    max-width: calc(100% - 60px);
 }
 
 .bibtex-image {
-    border: 1px solid #ccc;
-    margin-left: 10px;
-    margin-right: 20px;
-    width: 100px;
-    height: 100px;
     flex-shrink: 0;
+    width: 150px;
+    height: 150px;
+    border: 1px solid #ccc;
+}
+
+.bibtex-image img {
+    width: 100%;
+    height: 100%;
+    object-fit: cover;
 }
 
-.bibtex-details {
+.bibtex-contents {
     flex-grow: 1;
     display: flex;
-    align-items: center;
+    justify-content: center;
+    flex-direction: column;
+}
+
+.paper-title {
+    font-size: 1.1em;
+    text-align: justify;
+    padding-bottom: 8px;
+    border-bottom: 1px solid #bbb;
 }
 
-.bibtex-details p {
-    margin: 0;
-    line-height: 1.5;
+.paper-authors {
+    padding-top: 8px;
+}
+
+.paper-journal {
+    color: #666;
+}
+
+.bibtex-buttons {
+    margin-top: 8px;
+    display: flex;
+    gap: 10px;
 }