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Upgrade GitHub CI image #121

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dec0c7c
upgrade github ci image to ubuntu 24.04
drsteve Aug 13, 2025
f95362a
Trap DiffNum.pl output, use O0 for test, fix tolerance, use GSL2.5
drsteve Aug 13, 2025
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12 changes: 9 additions & 3 deletions .github/workflows/ramscb-ci.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -12,23 +12,29 @@ on:

jobs:
basic-suite:
runs-on: ubuntu-20.04
runs-on: ubuntu-24.04
steps:
- name: Install dependencies
run: |
sudo apt-get update -qq
sudo apt-get install -y make gcc g++ gfortran
sudo apt-get install -y make libopenmpi-dev openmpi-bin
sudo apt-get install -y libgsl-dev libgsl23 gsl-bin libgsl-dbg
sudo apt-get install -y libnetcdf-dev libnetcdff-dev nco netcdf-bin
wget https://mirror.us-midwest-1.nexcess.net/gnu/gsl/gsl-2.5.tar.gz
tar xzf gsl-2.5.tar.gz
cd gsl-2.5
./configure && make && sudo make install
cd ..
export LD_RUN_PATH=$LD_RUN_PATH:/usr/local/lib
gfortran --version
gsl-config --version
- name: Checkout
uses: actions/checkout@v2
- name: ram_test_tr
run: |
export PERL5LIB=$PERL5LIB:`pwd`
./Config.pl -install -compiler=gfortran -mpi=openmpi -openmp -ncdf -gsl -O3
export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/usr/local/lib
./Config.pl -install -compiler=gfortran -mpi=openmpi -openmp -ncdf -gsl -O0
make
make testCI
- name: unit_tests
Expand Down
52 changes: 26 additions & 26 deletions Makefile
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Original file line number Diff line number Diff line change
Expand Up @@ -236,30 +236,30 @@ test1_run:
cd ${TESTDIR1}; ${MPIRUN} ./ram_scb.exe | tee runlog

test1_check:
${SCRIPTDIR}/DiffNum.pl -b -a=1e-9 \
${SCRIPTDIR}/DiffNum.pl -b -a=1e-9 -r=1e-7 \
${TESTDIR1}/output_ram/log_d20130317_t000000.log \
${IMDIR}/output/test1/log.ref \
> test1.diff
${SCRIPTDIR}/DiffNum.pl -b -a=1e-9 \
> test1.diff || (cat test1.diff; exit 1;)
${SCRIPTDIR}/DiffNum.pl -b -a=1e-9 -r=1e-7 \
${TESTDIR1}/output_ram/pressure_d20130317_t001500.dat \
${IMDIR}/output/test1/pressure.ref \
>> test1.diff
>> test1.diff || (cat test1.diff; exit 1;)
ncdump -v "Flux_H","B_xyz" \
${TESTDIR1}/output_ram/sat1_d20130317_t000000.nc \
| sed -e '1,/data:/d' > \
${TESTDIR1}/output_ram/sat1.test
${SCRIPTDIR}/DiffNum.pl -b -a=1e-9 \
${SCRIPTDIR}/DiffNum.pl -b -a=1e-9 -r=1e-7 \
${TESTDIR1}/output_ram/sat1.test \
${IMDIR}/output/test1/sat1.ref \
>> test1.diff
>> test1.diff || (cat test1.diff; exit 1;)
ncdump -v "Flux_H","B_xyz" \
${TESTDIR1}/output_ram/sat2_d20130317_t000000.nc \
| sed -e '1,/data:/d' > \
${TESTDIR1}/output_ram/sat2.test
${SCRIPTDIR}/DiffNum.pl -b -a=1e-9 \
${SCRIPTDIR}/DiffNum.pl -b -a=1e-9 -r=1e-7 \
${TESTDIR1}/output_ram/sat2.test \
${IMDIR}/output/test1/sat2.ref \
>> test1.diff
>> test1.diff || (cat test1.diff; exit 1;)
@echo "Test Successful!"

#TEST 2----------------------------------
Expand Down Expand Up @@ -293,30 +293,30 @@ test2_run:
${MPIRUN} ./ram_scb.exe | tee runlog2;

test2_check:
${SCRIPTDIR}/DiffNum.pl -b -a=1e-9 \
${SCRIPTDIR}/DiffNum.pl -b -a=1e-9 -r=1e-7 \
${TESTDIR2}/output_ram/pressure_d20130317_t001500.dat \
${IMDIR}/output/test1/pressure.ref \
> test2.diff
> test2.diff || (cat test2.diff; exit 1;)
ncrcat ${TESTDIR2}/output_ram/sat1_d20130317_t000000.nc \
${TESTDIR2}/output_ram/sat1_d20130317_t001000.nc \
${TESTDIR2}/output_ram/sat1.nc
ncdump -v "Flux_H","B_xyz" ${TESTDIR2}/output_ram/sat1.nc \
| sed -e '1,/data:/d' > \
${TESTDIR2}/output_ram/sat1.test
${SCRIPTDIR}/DiffNum.pl -b -a=1e-9 \
${SCRIPTDIR}/DiffNum.pl -b -a=1e-9 -r=1e-7 \
${TESTDIR2}/output_ram/sat1.test \
${IMDIR}/output/test1/sat1.ref \
>> test2.diff
>> test2.diff || (cat test2.diff; exit 1;)
ncrcat ${TESTDIR2}/output_ram/sat2_d20130317_t000000.nc \
${TESTDIR2}/output_ram/sat2_d20130317_t001000.nc \
${TESTDIR2}/output_ram/sat2.nc
ncdump -v "Flux_H","B_xyz" ${TESTDIR2}/output_ram/sat2.nc \
| sed -e '1,/data:/d' > \
${TESTDIR2}/output_ram/sat2.test
${SCRIPTDIR}/DiffNum.pl -b -a=1e-9 \
${SCRIPTDIR}/DiffNum.pl -b -a=1e-9 -r=1e-7 \
${TESTDIR2}/output_ram/sat2.test \
${IMDIR}/output/test1/sat2.ref \
>> test2.diff
>> test2.diff || (cat test2.diff; exit 1;)
@echo "Test Successful!"

#TEST 3----------------------------------
Expand Down Expand Up @@ -344,14 +344,14 @@ test3_run:
cd ${TESTDIR3}; ${MPIRUN} ./ram_scb.exe | tee runlog;

test3_check:
${SCRIPTDIR}/DiffNum.pl -b -a=1e-9 \
${SCRIPTDIR}/DiffNum.pl -b -a=1e-9 -r=1e-7 \
${TESTDIR3}/output_ram/pressure_d20130317_t001500.dat \
${IMDIR}/output/test3/pressure.ref \
> test3.diff
${SCRIPTDIR}/DiffNum.pl -b -a=1e-9 \
> test3.diff || (cat test3.diff; exit 1;)
${SCRIPTDIR}/DiffNum.pl -b -a=1e-9 -r=1e-7 \
${TESTDIR3}/output_scb/hI_output_d20130317_t001500.dat \
${IMDIR}/output/test3/hI.ref \
>> test3.diff
>> test3.diff || (cat test3.diff; exit 1;)
@echo "Test Successful!"

#TEST 4----------------------------------
Expand Down Expand Up @@ -385,34 +385,34 @@ test4_run:
${MPIRUN} ./ram_scb.exe | tee runlog2;

test4_check:
${SCRIPTDIR}/DiffNum.pl -b -a=1e-9 \
${SCRIPTDIR}/DiffNum.pl -b -a=1e-9 -r=1e-7 \
${TESTDIR4}/output_ram/pressure_d20130317_t001500.dat \
${IMDIR}/output/test3/pressure.ref \
> test4.diff
${SCRIPTDIR}/DiffNum.pl -b -a=1e-9 \
> test4.diff || (cat test4.diff; exit 1;)
${SCRIPTDIR}/DiffNum.pl -b -a=1e-9 -r=1e-7 \
${TESTDIR4}/output_scb/hI_output_d20130317_t001500.dat \
${IMDIR}/output/test3/hI.ref \
>> test4.diff
>> test4.diff || (cat test4.diff; exit 1;)
ncrcat ${TESTDIR4}/output_ram/sat1_d20130317_t000000.nc \
${TESTDIR4}/output_ram/sat1_d20130317_t001000.nc \
${TESTDIR4}/output_ram/sat1.nc
ncdump -v "Flux_H","B_xyz" ${TESTDIR4}/output_ram/sat1.nc \
| sed -e '1,/data:/d' > \
${TESTDIR4}/output_ram/sat1.test
${SCRIPTDIR}/DiffNum.pl -b -a=1e-9 \
${SCRIPTDIR}/DiffNum.pl -b -a=1e-9 -r=1e-7 \
${TESTDIR4}/output_ram/sat1.test \
${IMDIR}/output/test3/sat1.ref \
>> test4.diff
>> test4.diff || (cat test4.diff; exit 1;)
ncrcat ${TESTDIR4}/output_ram/sat2_d20130317_t000000.nc \
${TESTDIR4}/output_ram/sat2_d20130317_t001000.nc \
${TESTDIR4}/output_ram/sat2.nc
ncdump -v "Flux_H","B_xyz" ${TESTDIR4}/output_ram/sat2.nc \
| sed -e '1,/data:/d' > \
${TESTDIR4}/output_ram/sat2.test
${SCRIPTDIR}/DiffNum.pl -b -a=1e-9 \
${SCRIPTDIR}/DiffNum.pl -b -a=1e-9 -r=1e-7 \
${TESTDIR4}/output_ram/sat2.test \
${IMDIR}/output/test3/sat2.ref \
>> test4.diff
>> test4.diff || (cat test4.diff; exit 1;)
@echo "Test Successful!"

#TEST EMIC----------------------------------
Expand Down
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