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@kkaris kkaris commented Jan 9, 2026

This PR changes the code in indra_db/client/readonly/query.py to allow setting a custom terms source. This allows for setting the gilda grounder to the SQLite adapter, which with this PR can be set with with the environment variable GILDA_TERMS.

The service Dockerfile is also updated to build the sqlite adapter for Gilda.

@bgyori
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bgyori commented Jan 9, 2026

I added a solution to try to get the Gilda version automatically so we don't have to do that manually, can you check if this works?

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kkaris commented Jan 10, 2026

Tried it out locally and it works.

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3 participants