[WIP] Support Regulatory Fusions

client/src/app/components/molecular-profiles/molecular-profile-fusion-variant-card/molecular-profile-fusion-variant-card.component.html

@@ -27,10 +27,10 @@
                 <cvc-feature-variant-tag
                   [variant]="variant"></cvc-feature-variant-tag>
               </nz-descriptions-item>
-              <!-- VICC compliant name -->
+              <!-- VICC Nomenclature -->
               <nz-descriptions-item
                 [nzSpan]="2"
-                nzTitle="VICC Compliant Name">
+                nzTitle="VICC Nomenclature">
                 {{ variant.viccCompliantName }}
               </nz-descriptions-item>
               <!-- aliases -->

client/src/app/components/variants/fusion-variant-summary/fusion-variant-summary.page.html

@@ -114,9 +114,9 @@
             nzSize="small"
             [nzColumn]="{ xxl: 2, xl: 2, lg: 1, md: 1, sm: 1, xs: 1 }"
             nzBordered="true">
-            <!-- VICC Compliant Name -->
+            <!-- VICC Nomenclature -->
             <nz-descriptions-item
-              nzTitle="VICC Compliant Name"
+              nzTitle="VICC Nomenclature"
               nzSpan="2">
               {{ variant.viccCompliantName }}
             </nz-descriptions-item>

client/src/app/components/variants/variant-popover/variant-popover.component.html

@@ -25,9 +25,9 @@
         nzLayout="horizontal"
         [nzColumn]="1"
         nzBordered="true">
-        <!-- VICC compliant name -->
+        <!-- VICC Nomenclature -->
         <nz-descriptions-item
-          nzTitle="VICC compliant name"
+          nzTitle="VICC Nomenclature"
           nzSpan="1"
           *ngIf="variant.__typename == 'FusionVariant'">
           {{ variant.viccCompliantName }}

client/src/app/forms/types/feature-select/feature-select.type.ts

@@ -211,6 +211,7 @@ export class CvcFeatureSelectField
         nzContent: CvcFusionSelectForm,
         nzData: {},
         nzFooter: null,
+        nzWidth: '40%',
       }
     )
 

client/src/app/forms/types/feature-select/fusion-select/fusion-add.query.gql

@@ -1,13 +1,15 @@
-mutation SelectOrCreateFusion($organizationId: Int, $fivePrimeGeneId: Int, $fivePrimePartnerStatus: FusionPartnerStatus!, $threePrimeGeneId: Int, $threePrimePartnerStatus: FusionPartnerStatus! ) {
+mutation SelectOrCreateFusion($organizationId: Int, $fivePrimeGeneId: Int, $fivePrimeRegulatoryFusionType: RegulatoryFusionType, $fivePrimePartnerStatus: FusionPartnerStatus!, $threePrimeGeneId: Int, $threePrimeRegulatoryFusionType: RegulatoryFusionType, $threePrimePartnerStatus: FusionPartnerStatus!) {
   createFusionFeature(input: {
     organizationId: $organizationId
     fivePrimeGene: {
       geneId: $fivePrimeGeneId,
       partnerStatus: $fivePrimePartnerStatus
+      regulatoryFusionType: $fivePrimeRegulatoryFusionType
     },
     threePrimeGene: {
       geneId: $threePrimeGeneId,
-      partnerStatus: $threePrimePartnerStatus
+      partnerStatus: $threePrimePartnerStatus,
+      regulatoryFusionType: $threePrimeRegulatoryFusionType
     }
 
   }) {

client/src/app/forms/types/feature-select/fusion-select/fusion-select.form.html

@@ -1,13 +1,46 @@
+<nz-radio-group
+  [(ngModel)]="fusionType"
+  nzButtonStyle="solid"
+  nzSize="small">
+  <label
+    nz-radio-button
+    nzValue="transcript"
+    >Transcript</label
+  >
+  <label
+    nz-radio-button
+    nzValue="regulatory"
+    >Regulatory</label
+  >
+</nz-radio-group>
+<br />
+<br />
+@if(fusionType == 'transcript') {
 <form
   nz-form
   [nzLayout]="layout"
-  (ngSubmit)="submitFusion(model)"
-  [formGroup]="form">
+  (ngSubmit)="submitFusion(transcriptModel)"
+  [formGroup]="transcriptForm">
   <formly-form
-    [form]="form"
-    [fields]="config"
-    [model]="model"
+    [form]="transcriptForm"
+    [fields]="transcriptConfig"
+    [model]="transcriptModel"
     [options]="options"
     (modelChange)="modelChange($event)">
   </formly-form>
 </form>
+} @else {
+<form
+  nz-form
+  [nzLayout]="layout"
+  (ngSubmit)="submitFusion(regulatoryModel)"
+  [formGroup]="regulatoryForm">
+  <formly-form
+    [form]="regulatoryForm"
+    [fields]="regulatoryConfig"
+    [model]="regulatoryModel"
+    [options]="options"
+    (modelChange)="modelChange($event)">
+  </formly-form>
+</form>
+}