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Py version sync #400

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Py version sync #400

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f8f4f1d
update deploy script to be more resilient
iimpulse Sep 9, 2025
0578a1d
update protobuf plugin
iimpulse Sep 9, 2025
84bca6b
bring python version to current deployed
iimpulse Sep 9, 2025
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16 changes: 8 additions & 8 deletions deploy-python.sh
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Original file line number Diff line number Diff line change
Expand Up @@ -13,13 +13,13 @@ cd $DIRECTORY || { echo "Deployment FAILED. Couldn't find directory" ; exit 1; }
createVirtualEnvironment(){
echo "Creating Python virtual environment at ${1}"
python3 -m venv "${1}" &> /dev/null
if [ ${?} = 1 ]; then
if [ $? -ne 0 ]; then
echo "Setup of Python virtual environment using 'python3 -m venv' failed. Trying 'virtualenv'"
virtualenv "${1}" &> /dev/null
fi
if [ ${?} = 1 ]; then
echo "Deployment FAILED. Could not create Python virtual environment"
exit 1;
if [ $? -ne 0 ]; then
echo "Deployment FAILED. Could not create Python virtual environment"
exit 1;
fi
fi
echo "Virtual environment created successfully";
}
Expand All @@ -40,9 +40,9 @@ python3 -m pip install build twine || { echo "Deployment FAILED. Failed to insta
python3 -m build || { echo "Deployment FAILED. Building python package" ; exit 1; }
# Deploy - Remove --repository testpypi flag for production.
if [ "$1" = "release-prod" ]; then
python3 -m twine upload dist/*
python3 -m twine upload dist/* || { echo "Deployment FAILED. Could not upload."; exit 1; }
elif [ "$1" = "release-test" ]; then
python3 -m twine upload --repository testpypi dist/*
python3 -m twine upload --repository testpypi dist/* || { echo "Deployment FAILED. Could not upload."; exit 1; }
else
echo "Python Release was prepared successfully. No release argument provided, use one of [release-prod, release-test] to make the production/test release."
fi
Expand All @@ -52,4 +52,4 @@ echo "Cleaning up the build environment and the build files"
deactivate
rm -rf build dist ${TEMP_DIRECTORY_VIRTUAL_ENV}
cd ..
./mvnw clean
./mvnw clean
2 changes: 1 addition & 1 deletion pom.xml
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Expand Up @@ -174,7 +174,7 @@
<plugin>
<groupId>io.github.ascopes</groupId>
<artifactId>protobuf-maven-plugin</artifactId>
<version>2.2.3</version>
<version>3.8.1</version>

<configuration>
<protocVersion>${protobuf.version}</protocVersion>
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2 changes: 1 addition & 1 deletion python/pyproject.toml
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Expand Up @@ -4,7 +4,7 @@ build-backend = "setuptools.build_meta"

[project]
name = "phenopackets"
version = "2.0.2.post2" # IMPORTANT: This must be kept in sync with `project.version` in the top-level `pom.xml`
version = "2.0.2.post5" # IMPORTANT: This must be kept in sync with `project.version` in the top-level `pom.xml`
requires-python = ">=3.8"
description = "Phenopacket Schema"
readme = "README.rst"
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