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TravisCI -> gh actions

Status: Open.

#99 In fhcrc/seqmagick;

· jgallowa07 opened on Mar 11, 2023

nose -> nose2

Status: Open.

#98 In fhcrc/seqmagick;

· jgallowa07 opened on Mar 11, 2023

NameError: name 'IUPAC' is not defined in primer-trim.py

Status: Open.

#95 In fhcrc/seqmagick;

· bowmanjeffs opened on Apr 8, 2021

Trim high identity sites/columns from alignment?

Status: Open.

#83 In fhcrc/seqmagick;

· metasoarous opened on Mar 31, 2020

fasta to nexus conversion -- ValueError: Sequences must all be the same length

Status: Open.

#81 In fhcrc/seqmagick;

· asttra opened on Nov 30, 2019

pip3 install preferred over pip3 install

Status: Open.

#78 In fhcrc/seqmagick;

· tseemann opened on May 30, 2018

adding N to the "gap characters"

Status: Open.

#72 In fhcrc/seqmagick;

· dunleavy005 opened on Apr 2, 2018

Obtain the reverse fastq of forward single reads using seqmagick?

Status: Open.

#70 In fhcrc/seqmagick;

· galud27 opened on Mar 19, 2018

restore support for bz2 compression

Status: Open.

#66 In fhcrc/seqmagick;

· nhoffman opened on Dec 6, 2017

Behavior of --squeeze coupled with sequence selection

Status: Open.

#64 In fhcrc/seqmagick;

· metasoarous opened on Jan 26, 2017

more detailed seqmagick info on specific sequences

Status: Open.

#63 In fhcrc/seqmagick;

· metasoarous opened on Jan 26, 2017

backtrans-align breaks if any dna seq length isn't a multiple of 3

Status: Open.

#62 In fhcrc/seqmagick;

· metasoarous opened on Jan 20, 2017