Test fixing macos workflows

.github/workflows/build.yml

@@ -15,19 +15,19 @@ jobs:
     runs-on: ubuntu-24.04
     steps:
       - name: checkout
-        uses: actions/checkout@v5
+        uses: actions/checkout@v6
         with: { submodules: recursive }
       - uses: prefix-dev/setup-pixi@v0.9.3
         with:
-          pixi-version: v0.49.0
+          pixi-version: v0.63.2
       - name: digitize
         shell: pixi run bash -e {0}
         run: pixi run -e dev convert
       - name: validate packages
         shell: pixi run bash -e {0}
         run: pixi run -e dev validate
       - name: upload data artifact
-        uses: actions/upload-artifact@v5
+        uses: actions/upload-artifact@v6
         with:
           name: data-${{ github.event.pull_request.number }}
           path: |

.github/workflows/test.yml

@@ -22,11 +22,11 @@ jobs:
         os: ["ubuntu-latest", "macos-latest", "windows-latest"]
     steps:
       - name: checkout
-        uses: actions/checkout@v5
+        uses: actions/checkout@v6
         with: { submodules: recursive }
       - uses: prefix-dev/setup-pixi@v0.9.3
         with:
-          pixi-version: v0.49.0
+          pixi-version: v0.63.2
       - name: doctest
         shell: pixi run bash -e {0}
         run: pixi run -e ${{ matrix.environment }} doctest

.github/workflows/validation.yml

@@ -13,11 +13,11 @@ jobs:
     runs-on: ubuntu-latest
     steps:
       - name: checkout
-        uses: actions/checkout@v5
+        uses: actions/checkout@v6
         with: { submodules: recursive }
       - uses: prefix-dev/setup-pixi@v0.9.3
         with:
-          pixi-version: v0.49.0
+          pixi-version: v0.63.2
       - name: validate input yaml
         shell: pixi run bash -e {0}
         run: pixi run -e dev validate-yaml

pyproject.toml

@@ -18,7 +18,7 @@ packages = [
     "echemdb_ecdata",
 ]
 
-[tool.pixi.project]
+[tool.pixi.workspace]
 channels = ["conda-forge"]
 platforms = ["linux-64", "osx-64", "win-64"]
 
@@ -66,8 +66,9 @@ pytest-remotedata = "*"
 convert = "cd data && make -j$(nproc)"
 # To validate the metadata against a specific version preceded the version by `tags` such as `tags/0.3.1`.
 # To validate the metadata against metadata in a specific branch use `head/branch-name`.
-validate = { args = [ { "arg" = "version", "default" = "tags/0.3.1" } ],cmd = "check-jsonschema --schemafile https://raw.githubusercontent.com/echemdb/metadata-schema/refs/{{ version }}/schemas/echemdb_package.json --base-uri https://raw.githubusercontent.com/echemdb/metadata-schema/refs/{{ version }}/schemas/echemdb_package.json --no-cache $(find ./data/generated/svgdigitizer/ -type f -name '*.json')" }
-validate-yaml = { args = [ { "arg" = "version", "default" = "tags/0.3.1" } ], cmd = "check-jsonschema --schemafile https://raw.githubusercontent.com/echemdb/metadata-schema/refs/{{ version }}/schemas/svgdigitizer.json --base-uri https://raw.githubusercontent.com/echemdb/metadata-schema/refs/{{ version }}/schemas/svgdigitizer.json --no-cache $(find ./literature/svgdigitizer/ -type f -name '*.yaml')" }
+# Run `check-jsonschema` only if JSON files exist; otherwise print a message.
+validate = { args = [ { "arg" = "version", "default" = "tags/0.3.2" } ], cmd = "sh -c \"if find ./data/generated/svgdigitizer/ -type f -name '*.json' -print -quit 2>/dev/null | grep -q .; then find ./data/generated/svgdigitizer/ -type f -name '*.json' -print0 | xargs -0 check-jsonschema --schemafile https://raw.githubusercontent.com/echemdb/metadata-schema/refs/{{ version }}/schemas/echemdb_package.json --base-uri https://raw.githubusercontent.com/echemdb/metadata-schema/refs/{{ version }}/schemas/echemdb_package.json --no-cache; else echo 'No JSON files to validate'; fi\"" }
+validate-yaml = { args = [ { "arg" = "version", "default" = "tags/0.3.2" } ], cmd = "sh -c \"if find ./literature/svgdigitizer/ -type f -name '*.yaml' -print -quit 2>/dev/null | grep -q .; then find ./literature/svgdigitizer/ -type f -name '*.yaml' -print0 | xargs -0 check-jsonschema --schemafile https://raw.githubusercontent.com/echemdb/metadata-schema/refs/{{ version }}/schemas/svgdigitizer.json --base-uri https://raw.githubusercontent.com/echemdb/metadata-schema/refs/{{ version }}/schemas/svgdigitizer.json --no-cache; else echo 'No YAML files to validate'; fi\"" }
 doctest = "pytest -n auto --doctest-modules echemdb_ecdata"
 
 [tool.pixi.feature.lint.dependencies]