CI Runner for label and comment checking

scripts/java/src/main/java/main/CIRunner.java

@@ -23,10 +23,13 @@ public class CIRunner implements CommandLineRunner {
 	@Autowired
 	private SubclassNothingRewriter gciRewriter;
 
+	@Autowired
+	private LabelCommentChecker labelCommentChecker;
+
 
 	@Override
 	public void run(final String... args) throws Exception {
-		final CIRunnable[] toRun = {gciRewriter, isDefinedInAdder, versionInfoAdder, collapser, ontologySaver};
+		final CIRunnable[] toRun = {labelCommentChecker, gciRewriter, isDefinedInAdder, versionInfoAdder, collapser, ontologySaver};
 		for (final var next : toRun) {
 			next.run();
 		}

scripts/java/src/main/java/main/ci_runners/LabelCommentChecker.java

@@ -0,0 +1,64 @@
+package main.ci_runners;
+
+import main.OntologyManager;
+import org.semanticweb.owlapi.model.OWLAnnotationProperty;
+import org.semanticweb.owlapi.model.OWLOntology;
+import org.semanticweb.owlapi.model.parameters.Imports;
+import org.slf4j.Logger;
+import org.slf4j.LoggerFactory;
+import org.springframework.beans.factory.annotation.Autowired;
+import org.springframework.context.annotation.Lazy;
+import org.springframework.stereotype.Component;
+
+@Component
+@Lazy
+public class LabelCommentChecker implements CIRunnable {
+    /**
+     * {@link Logger} of this class.
+     */
+    private static final Logger LOGGER = LoggerFactory.getLogger(LabelCommentChecker.class);
+
+    private final OntologyManager ontologyManager;
+
+    @Autowired
+    public LabelCommentChecker(final OntologyManager ontologyManager) {
+        this.ontologyManager = ontologyManager;
+    }
+
+    @Override
+    public void run() {
+        StringBuilder errorString = new StringBuilder();
+        for (final OWLOntology ontology : ontologyManager.getOntologyManager().getOntologies()) {
+            errorString.append(checkLabelsComments(ontology));
+        }
+        if (errorString.length() > 0) {
+            throw new RuntimeException("Found missing labels or comments:\n" + errorString);
+        }
+    }
+
+    private String checkLabelsComments(final OWLOntology ontology) {
+        LOGGER.info("Checking labels and comments in {}", ontology.getOntologyID().getOntologyIRI());
+        StringBuilder errorString = new StringBuilder();
+
+        for (final var entity : ontology.getSignature()) {
+            if (entity.isBuiltIn() || entity instanceof OWLAnnotationProperty) {
+                continue;
+            }
+            final var properties = ontology.getAnnotationAssertionAxioms(entity.getIRI(), Imports.INCLUDED);
+            boolean hasLabel = properties.stream().anyMatch(axiom -> axiom.getProperty().isLabel());
+            boolean hasComment = properties.stream().anyMatch(axiom -> axiom.getProperty().isComment());
+
+            String missing = "";
+            if (!hasLabel && !hasComment)   missing = "label and comment";
+            else if (!hasLabel)             missing = "label";
+            else if (!hasComment)           missing = "comment";
+
+            if (!missing.isEmpty()) {
+                LOGGER.error("Entity {} is missing {}", entity, missing);
+                errorString.append(missing).append(": ").append(entity.getIRI()).append("\n");
+            }
+        }
+        return errorString.toString();
+    }
+}
+