Update Bokeh to 3.4.3

[BenjaminCharmes]

First attempt to update Bokeh to 3.x.x

Currently using 3.4.3, but could normally use an even newer version without problems (latest 3.7.3 (May 2025))

Need more discussion, I'll put it on ready to review if some people want to test locally.

[codecov]

Codecov Report

Attention: Patch coverage is 48.33333% with 31 lines in your changes missing coverage. Please review.

Project coverage is 71.53%. Comparing base (05f7618) to head (f0b6fed).
Report is 21 commits behind head on main.

Files with missing lines	Patch %	Lines
pydatalab/src/pydatalab/bokeh_plots.py	57.50%	17 Missing ⚠️
pydatalab/src/pydatalab/apps/echem/blocks.py	0.00%	2 Missing ⚠️
pydatalab/src/pydatalab/apps/eis/__init__.py	0.00%	2 Missing ⚠️
pydatalab/src/pydatalab/apps/ftir/__init__.py	0.00%	2 Missing ⚠️
pydatalab/src/pydatalab/apps/raman/blocks.py	0.00%	2 Missing ⚠️
pydatalab/src/pydatalab/apps/uvvis/__init__.py	0.00%	2 Missing ⚠️
pydatalab/src/pydatalab/apps/xrd/blocks.py	33.33%	2 Missing ⚠️
pydatalab/src/pydatalab/blocks/common.py	0.00%	2 Missing ⚠️

Additional details and impacted files

@@            Coverage Diff             @@
##             main    #1240      +/-   ##
==========================================
- Coverage   71.73%   71.53%   -0.20%     
==========================================
  Files          66       66              
  Lines        4482     4515      +33     
==========================================
+ Hits         3215     3230      +15     
- Misses       1267     1285      +18     

Files with missing lines	Coverage Δ
pydatalab/src/pydatalab/apps/nmr/blocks.py	78.57% <100.00%> (+0.15%)	⬆️
pydatalab/src/pydatalab/apps/tga/blocks.py	73.58% <100.00%> (+0.50%)	⬆️
pydatalab/src/pydatalab/apps/echem/blocks.py	27.18% <0.00%> (-0.27%)	⬇️
pydatalab/src/pydatalab/apps/eis/__init__.py	47.36% <0.00%> (-1.29%)	⬇️
pydatalab/src/pydatalab/apps/ftir/__init__.py	67.34% <0.00%> (-1.41%)	⬇️
pydatalab/src/pydatalab/apps/raman/blocks.py	80.00% <0.00%> (-0.63%)	⬇️
pydatalab/src/pydatalab/apps/uvvis/__init__.py	54.16% <0.00%> (-0.77%)	⬇️
pydatalab/src/pydatalab/apps/xrd/blocks.py	62.23% <33.33%> (-0.44%)	⬇️
pydatalab/src/pydatalab/blocks/common.py	58.88% <0.00%> (-0.67%)	⬇️
pydatalab/src/pydatalab/bokeh_plots.py	79.21% <57.50%> (-2.61%)	⬇️

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[cypress]

datalab    Run #3476

Run Properties:   Failed #3476  •  a74b3b0a4f ℹ️: Merge f0b6fedb80152e711d54f64b88436011b53bf8b6 into 66be21f5343304ebf7a9c1486583...

Project	datalab
Branch Review	bc/update-bokeh
Run status	Failed #3476
Run duration	05m 52s
Commit	a74b3b0a4f ℹ️: Merge f0b6fedb80152e711d54f64b88436011b53bf8b6 into 66be21f5343304ebf7a9c1486583...
Committer	Ben Charmes
View all properties for this run ↗︎

---

Test results
Failures	6
Flaky	0
Pending	0
Skipped	0
Passing	144
View all changes introduced in this branch ↗︎

---

Tests for review

  cypress/e2e/editPage.cy.js • 2 failed tests • End-to-end tests (firefox)

View Output

Test		Artifacts
Edit Page > Uploads an XRD file, makes an XRD block and checks that the plot works		Screenshots
Edit Page > Uploads an Raman data file, makes a Raman block and checks that the plot is shown		Screenshots

  cypress/e2e/editPage.cy.js • 2 failed tests • End-to-end tests (electron)

View Output

Test		Artifacts
Edit Page > Uploads an XRD file, makes an XRD block and checks that the plot works		Test Replay Screenshots
Edit Page > Uploads an Raman data file, makes a Raman block and checks that the plot is shown		Test Replay Screenshots

  cypress/e2e/editPage.cy.js • 2 failed tests • End-to-end tests (chrome)

View Output

Test		Artifacts
Edit Page > Uploads an XRD file, makes an XRD block and checks that the plot works		Test Replay Screenshots
Edit Page > Uploads an Raman data file, makes a Raman block and checks that the plot is shown		Test Replay Screenshots