Repository for the ExG course under the "Healthcare Engineering" specialization at IMT Atlantique.

Contents: -Course slides -Lab Session -References -Resources for Project

Projet Exploration de l’activité cérébrale (IRMf / EEG)

Google Doc with instructions and projects list 📝 https://docs.google.com/document/d/1P4zjQvWLArmB2xZGjzhero-CcGoBNfLzHPuSlBhE118/edit?usp=sharing

References

MEEG

EEG textbooks :

https://brainmaster.com/software/pubs/brain/Nunez%202ed.pdf

Picton et al. 2000 : http://cb3.unl.edu/dbrainlab/wp-content/uploads/sites/2/2013/12/0.-ERP-guidelines-Picton-et-al-2000.pdf

Standardization for EEG datasets : BIDS-EEG: https://pure.mpg.de/rest/items/item_3037703/component/file_3039868/content

EEG informed fMRI https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5808233/

Best practices in data analysis and sharing in neuroimaging using MEEG https://osf.io/a8dhx

Electromagnetic brain mapping using MEG & EEG https://www.researchgate.net/profile/Sylvain_Baillet/publication/235638511_Electromagnetic_Brain_Mapping_using_MEG_EEG/links/0912f5122e4f65b081000000/Electromagnetic-Brain-Mapping-using-MEG-EEG.pdf

Preprocessing, artifact detection and removal

https://mne.tools/stable/auto_tutorials/preprocessing/plot_10_preprocessing_overview.html

https://mne.tools/stable/auto_tutorials/preprocessing/plot_40_artifact_correction_ica.html

https://mne.tools/stable/auto_tutorials/preprocessing/plot_55_setting_eeg_reference.html#sphx-glr-auto-tutorials-preprocessing-plot-55-setting-eeg-reference-py

ECG / EKG

Extremely detailed ressource on interpreting ECG in medical applications:

https://ecg.utah.edu/ or pdf version https://ecg.utah.edu/pdf/

Book chapter "Electrocardiography". David M. Mirvis and Ary L. Goldberger : http://www.doctor33.it/cont/download-center-files/17519/cap-electrocardiography-x20968allp1.pdf

Good video explaining the PQRST and the sinus rhythm https://www.youtube.com/watch?v=izX9woINRbM

From the same professor, a basic video about the cardiovascular system

https://www.youtube.com/watch?v=VWamhZ8vTL4

Deep learning for ECG https://arxiv.org/pdf/1707.01836.pdf (clinical)

Emotion prediction (videos) using ECG : https://ieeexplore.ieee.org/stamp/stamp.jsp?arnumber=8543567

EMG

Techniques of EMG signal analysis: detection, processing, classification and applications- MBI Reaz, MS Hussain, F Mohd-Yasin - Biological procedures online, 2006

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1455479/

Surface electromyography signal processing and classification techniques RH Chowdhury, MBI Reaz, MABM Ali, AAA Bakar… - Sensors, 2013

https://www.mdpi.com/1424-8220/13/9/12431

Deep learning for EMG https://ieeexplore.ieee.org/abstract/document/8630679