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43 changes: 43 additions & 0 deletions datasets/brainglobe.yaml
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Name: BrainGlobe Atlases
Description: BrainGlobe provides an archive and standardised interface to anatomical atlases from multiple species. This dataset includes these atlases, and other data (e.g. sample neuroanatomy data) to allow the greatest use of the atlases.
Documentation: https://brainglobe.info/documentation/brainglobe-atlasapi/usage/atlas-details.html
Contact: [email protected]
ManagedBy: "[BrainGlobe](https://brainglobe.info/)"
UpdateFrequency: When new atlases are packaged
Tags:
- biology
- life sciences
- digital preservation
- Homo sapiens
- image processing
- imaging
- light-sheet microscopy
- magnetic resonance imaging
- medical imaging
- microscopy
- Mus musculus
- neurobiology
- neuroimaging
- neuroscience
- Rattus norvegicus
- volumetric imaging
- zarr
- aws-pds
License: Creative Commons CC0 1.0 Universal
Citation: "Claudi et al., (2020). BrainGlobe Atlas API: a common interface for neuroanatomical atlases. Journal of Open Source Software, 5(54), 2668, https://doi.org/10.21105/joss.02668"
Resources:
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Hi @adamltyson please add the SNS topic as well. This guide describes how you can add the SNS topic: https://github.com/aws-samples/aws-opendata-samples/blob/main/guidances/adding-sns-topic-to-roda.md

- Description: Atlases and sample data in a public bucket
ARN: arn:aws:s3:::brainglobe
Region: us-west-2
Type: S3 Bucket
DataAtWork:
Tutorials:
- Title: Interacting with cloud atlas data through Python
URL: https://brainglobe.info/aws_examples/explore_atlas.html
AuthorName: Alessandro Felder
AuthorURL: https://github.com/alessandrofelder
Publications:
- Title: "BrainGlobe Atlas API: a common interface for neuroanatomical atlases"
URL: https://doi.org/10.21105/joss.02668
AuthorName: Federico Claudi, Luigi Petrucco, Adam L. Tyson et al.
AuthorURL: https://brainglobe.info/