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ARTICnetwork

This is the ARTICnetwork project, a Wellcome Trust funded project to provide a system for real-time genomic epidemiology of virus outbreaks.

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  1. artic-ncov2019 artic-ncov2019 Public

    ARTIC nanopore protocol for nCoV2019 novel coronavirus

    Python 170 164

  2. fieldbioinformatics fieldbioinformatics Public

    Forked from zibraproject/zika-pipeline

    The ARTIC fieldbioinformatics pipeline

    Python 125 69

  3. rampart rampart Public

    Read Assignment, Mapping, and Phylogenetic Analysis in Real Time

    JavaScript 82 34

  4. civet civet Public

    Cluster Investigation & Virus Epidemiology Tool

    Python 50 14

  5. primer-schemes primer-schemes Public

    Primer schemes for real-time genome epidemiology

    Python 29 42

  6. primalscheme3 primalscheme3 Public

    Primalscheme3. Generation of highly multiplex primerschemes

    HTML 17 6

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