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DNAnexus module within stor #2

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DNAnexus module within stor #2

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20877bc
initial test commit
Aug 15, 2018
d2b24d0
partial unit tests for DX - committed for feedback
Aug 17, 2018
f35311e
adding few more unit tests for dxpath.list
Aug 17, 2018
fbfe959
adding tests for dxpath.walkfiles
Aug 17, 2018
91440f1
adding encoding env variables to tox for pycharm bug
Aug 17, 2018
9f81fce
adding tests for dxIDs and TestGlob
Aug 17, 2018
39bcb9f
adding DXVirtualPath, DXCanonicalPath and stat methods
Aug 20, 2018
26e0c7b
Cleaned up and added tests for initializing DXPaths
Aug 21, 2018
d3fe87a
incorporating review comments
Aug 22, 2018
f782c2a
simplifying find_dx_class and other review comments
Aug 22, 2018
85fa13f
temporary non-working commit to sync up on vcr
Aug 23, 2018
b011328
implementations of list, listdir and walkfiles
Aug 24, 2018
f436ecf
adding functionalities and tests for DX
Sep 4, 2018
6420870
adding environment variables in toc
Sep 4, 2018
9167353
Cleaning up code and adding list_iter etc: code review comments
Sep 5, 2018
2b3520f
implementing last review comment on glob/walkfiles
Sep 5, 2018
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3 changes: 3 additions & 0 deletions requirements-dev.txt
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Original file line number Diff line number Diff line change
@@ -1,5 +1,7 @@
# Requirements needed for running the test suite.

cached-property
dxpy
flake8==2.4.1
freezegun==0.3.6
mock==1.3.0
Expand All @@ -8,3 +10,4 @@ testfixtures==4.7.0
coverage==4.4.1
pytest==3.2.3
pytest-cov==2.5.1
vcrpy-unittest
4 changes: 3 additions & 1 deletion stor/base.py
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Expand Up @@ -45,7 +45,9 @@ def __new__(cls, path):
if cls is Path:
if not hasattr(path, 'startswith'):
raise TypeError('must be a string like')
if utils.is_swift_path(path):
if utils.is_dx_path(path):
cls = utils.find_dx_class(path)
elif utils.is_swift_path(path):
from stor.swift import SwiftPath

cls = SwiftPath
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