Medical Image Segmentation

Prerequisites

Installation

The used python version is 3.7. Run the following command to install the dependencies locally,

pip install -r ./requirements.txt --user

or you may install it under a virtual environment like

python -m venv my_venv
source my_venv/bin/activate
pip install -r ./requirements.txt

Prepare data

See here for more details.

Deployments

1. Brainstem Parotids segmentation v1
2. Brainstem Parotids segmentation v2
3. Visual System segmentation
4. 4-class Segmentation
5. 4-class Domain Adaptation