Automatic Cell Tuner (ACT) is a workflow for semi-automated tuning of somatic conductances of biophysical cell models. ACT implements the functional current segmentation approach (Alturki et al., 2016) allowing for modular opitmization that effectively constrains the parameter space and reduces the search time.
Currently, only installation from source is supported.
git clone https://github.com/V-Marco/ACT.git
pip install .See the documentation page for examples and the API reference.
TBD
In addition to the act package and documentation, the repository contains data and experimental setups used in our paper (data/ and experiments/ directories).