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@UMCUGenetics

UMCU Genetics

Repository for genetics code

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  1. RNASeq-NF RNASeq-NF Public

    RNASeq-NF is an NGS analysis pipeline for RNA expression quantification.

    Nextflow 8 8

  2. NF-IAP NF-IAP Public

    Illumina Analysis Pipeline in Nextflow

    Nextflow 3 5

  3. NextflowModules NextflowModules Public

    UMCU Genetics Nextflow modules

    Nextflow 28 10

Repositories

Showing 10 of 154 repositories
  • DIMS Public

    Direct Infusion Mass Spectrometry pipeline

    UMCUGenetics/DIMS’s past year of commit activity
    Nextflow 2 MIT 2 11 4 Updated Dec 9, 2025
  • CustomModules Public
    UMCUGenetics/CustomModules’s past year of commit activity
    R 3 MIT 0 0 5 Updated Dec 9, 2025
  • Epi2Me_wf-human-variation Public Forked from epi2me-labs/wf-human-variation
    UMCUGenetics/Epi2Me_wf-human-variation’s past year of commit activity
    Nextflow 0 73 0 1 Updated Dec 5, 2025
  • HammingDistanceCalculator Public

    Calculates the hamming distance of sequences

    UMCUGenetics/HammingDistanceCalculator’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Dec 3, 2025
  • clarity_epp Public

    Clarity LIMS epp scripts

    UMCUGenetics/clarity_epp’s past year of commit activity
    Python 1 MIT 0 0 2 Updated Dec 2, 2025
  • Dx_resources Public

    Resources used in diagnostics pipelines

    UMCUGenetics/Dx_resources’s past year of commit activity
    Python 3 MIT 0 15 1 Updated Dec 2, 2025
  • GIABEval Public

    Genome-in-a-bottle evaluation tool to determine statistics

    UMCUGenetics/GIABEval’s past year of commit activity
    Nextflow 2 MIT 0 0 1 Updated Nov 24, 2025
  • USEQ_tools Public

    Utility scripts to work with Genologics Clarity LIMS

    UMCUGenetics/USEQ_tools’s past year of commit activity
    Python 2 MIT 0 0 2 Updated Nov 20, 2025
  • franklin_client Public

    Python package for Franklin API

    UMCUGenetics/franklin_client’s past year of commit activity
    0 MIT 0 0 0 Updated Nov 10, 2025
  • DIMSdb Public

    database for Direct Infusion Mass Spectrometry pipeline

    UMCUGenetics/DIMSdb’s past year of commit activity
    0 MIT 0 0 0 Updated Nov 3, 2025
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