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Upload Ensemble TWAS notebook #1320

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a17c30a
Ensemble TWAS weight notebook
jaempawi May 11, 2026
d3db6f0
Merge branch 'StatFunGen:main' into main
jaempawi May 11, 2026
7780dbf
Add new sections for snRNAseq and pseudobulk preprocessing
jaempawi May 19, 2026
5bd3996
Delete code/pecotmr_integration/ensemble_twas_weights.ipynb
jaempawi May 19, 2026
b27a39f
Add new QC notebooks to the table of contents
jaempawi May 19, 2026
09605f6
Merge branch 'StatFunGen:main' into main
jaempawi May 19, 2026
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5 changes: 5 additions & 0 deletions website/_toc.yml
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Expand Up @@ -26,6 +26,11 @@ parts:
- file: code/molecular_phenotypes/calling/RNA_calling.ipynb
- file: code/molecular_phenotypes/QC/bulk_expression_QC.ipynb
- file: code/molecular_phenotypes/QC/bulk_expression_normalization.ipynb
- file: code/molecular_phenotypes/QC/apa_impute.ipynb
- file: code/molecular_phenotypes/snRNAseq_preprocessing.ipynb
- file: code/molecular_phenotypes/QC/pseudobulk_preprocessing.ipynb
- file: code/molecular_phenotypes/QC/pseudobulk_expression_aggregation_QC_norm.ipynb
- file: code/molecular_phenotypes/QC/pseudobulk_mega_expression_QC_and_normalization.ipynb
- file: code/molecular_phenotypes/methylation.ipynb
sections:
- file: code/molecular_phenotypes/calling/methylation_calling.ipynb
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