EBAME10 2025 Quince group Tutorials

These tutorial needs the EBAME-Quince appliance

Name		Name	Last commit message	Last commit date
Latest commit History 363 Commits
Figures		Figures
configs		configs
gtdb		gtdb
scripts		scripts
tmp/preruns		tmp/preruns
Assembly2025.md		Assembly2025.md
Bash_tutorial.md		Bash_tutorial.md
Binning.md		Binning.md
HiFi.md		HiFi.md
HiFi2023.md		HiFi2023.md
Local_install.sh		Local_install.sh
LongRead2024.md		LongRead2024.md
Nanopore.md		Nanopore.md
Nanopore2025.md		Nanopore2025.md
README.md		README.md
StrainResolution.md		StrainResolution.md
TraitInference.md		TraitInference.md
assembly_graph_with_scaffolds.gfa		assembly_graph_with_scaffolds.gfa
binning.smk		binning.smk
checkm.out		checkm.out
conda_env_Assembly.yaml		conda_env_Assembly.yaml
conda_env_LongReads.yaml		conda_env_LongReads.yaml
conda_env_LongReads_base.yaml		conda_env_LongReads_base.yaml
conda_env_Trait_inference.yaml		conda_env_Trait_inference.yaml
config_correct.yaml		config_correct.yaml
config_template.yaml		config_template.yaml
download_dataset.sh		download_dataset.sh
graph_pack_d10.gfa		graph_pack_d10.gfa
install.sh		install.sh
strong_resolved.yaml		strong_resolved.yaml

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