MorPhiC DREAM Challenge Infrastructure

Repository containing the technical infrastructure and code for the MorPhiC DREAM Challenge

The challenge infrastructure is powered by the SynapseWorkflowOrchestrator orchestration tool, which continuously monitors the challenge for new submissions, automatically processing and evaluating them using the steps defined in workflow.cwl.

Folder structure

jax-morphic
├── evaluation      // core scoring and validation scripts
├── README.md
├── scripts         // scripts called by the individual CWL scripts
├── steps           // individual CWL scripts (called by the main workflow CWL)
└── workflow.cwl    // CWL workflow for evaluating submissions

Evaluation Overview

more details coming soon

Baseline GRN Models

See: https://gitlab.com/jaxcomp/tutorial_dream_challenge/-/tree/main?ref_type=heads