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1. detectCO_by_scRNAseq detectCO_by_scRNAseq Public

   A pipeline of crossover identification based on scRNA-seq data, also including analysis of recombiantion results. Specifically, a project about the recombination of a holocentric plant - R. brevius…

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2. Rhynchospora_tenuis_project Rhynchospora_tenuis_project Public

   Cutstom scripts for the manuscript of R. tenuis project

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3. HoloRecomb_project HoloRecomb_project Public

   Custom scripts for the project of Rhynchospora recombination comparison

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4. splitSeqs-ann splitSeqs-ann Public

   A simple script to split contigs into samller sequences based on annotations

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5. hapdup_finder hapdup_finder Public

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6. HiC_map_by_juicer HiC_map_by_juicer Public

   A short tutorial that delineates Hi-C map generation using juicer

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