Contributors: Jay Lennon (lennonj@indiana.edu), Ken Locey, & Mario Muscarella
Funding: Development of Indiana University's first Quantitative Biodiversity class, including the materials in this repository, were supported by a National Science Foundation Dimensions of Biodiversity grant (1442246) awarded to Drs Jay Lennon and Ken Locey of Indiana University, Bloomington.
###Contents
CourseRequirements.md: Software required to use the Quantative Biodiversity 2015 assignments and workflow.
CourseResources.md: Helpful links for learning about GitHub, R, RStudio, ggplot2, and phylogenetic ecology tools Picante and Kembel
GitAutomation: A folder containing bash scripts for automating the deployment of assignments and materials to student repositories, and a text file containing the names of the students repositories (or any repositories receiving automated updates).
GitFlow.pdf: Nicely diagrammed illustrations of the GitHub-based Quantative Biodiversity workflow
Resources: A basic set reference materials relating to Git, R, Unix/Linux, and the installation of various software.
- GitFlow-All.pdf
- RMarkdownCheatSheet.pdf
- RMarkdownCheatSheet.png
- R_ReferenceCard.pdf
- SoftwareInstallation.Rmd
- SoftwareInstallation.pdf
- Unix_Reference.pdf
- git-cheat-sheet.pdf
- git-cheat-sheet.png
- Syllabus.pdf and Syllabus.Rmd: For the 2015 class