v1.0.0

MatrixTableConsumer v1.1.0

To install this package run (you need to have Go):

pip install build
pip install .

To compile Go modules with C types to work with Python run:

export CGO_ENABLED=1

go build -o functions.so -buildmode=c-shared functions/functions.go

We have a class MatrixTableConsumer, which performs operations on Hail matrix table:

• MatrixTableConsumer().prepare_metadata_for_saving saves matrix table metadata to json format

• MatrixTableConsumer().prepare_metadata_for_loading loads table metadata

• MatrixTableConsumer().collect gives num_rows rows from vcf file (it can also open vcf.gz)

• MatrixTableConsumer().collect_all collects all table rows from vcf file (it can also open vcf.gz)

• MatrixTableConsumer().convert_rows_to_hail converts rows to Matrix Table format

• MatrixTableConsumer().create_hail_table collects table from rows

• MatrixTableConsumer().combine_hail_matrix_table_and_table combines MatrixTable and Table

• MatrixTableConsumer().count returns number of rows in the vcf file

You may donate to matrix_table_consumer project:

• Ethereum: 0xE2e2D675a3843f4ED211BB93847ad18b0A6fe7c6