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MonashBioinformaticsPlatform/Proteomics-Intro-R-Workshop-2020

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Pre-Lorne Intro to R workshop 2020:

Important links:

Schedule:

Day 1:

Time Session
9:00am - 10.30am Welcome overview, Starting out in R
10.30am - 11.00am Morning tea
11.00am - 1.00pm Data frames
1:00pm – 2:00pm Lunch
2:00pm – 3.30pm Data frames, plotting with ggplot2
3.30pm – 4:00pm Afternoon Tea
3:30pm – 5.30pm Working with Cytoscape

Day 2:

Time Session
9:00am - 10.30am Proteomics data Viz
10.30am - 11.00am Morning tea
11.00am - 1.00pm Summarizing data, Rmarkdown
1:00pm – 2:00pm Lunch
2:00pm – 3.30pm Data Viz Critique Tutorial
3.30pm – 4:00pm Afternoon Tea
4.00pm – 5:30pm Data Viz Critique Tutorial

Proteomics Intro to R workshop 2020

Introduction to R workshop material. This is an updated full day workshop.

This workshop material uses the bookdown R package.

To re-build the html and pdf documents and zip file, use:

make

To recreate the .csv files from files downloaded from Gapminder, use:

make ingest

opening_slides_template.pptx can be used as a template for an opening slideshow. Fill in instructor names and the location of your workshop etherpad. The workshop etherpad serves as the central jumping off point for the workshop, and should list at the top:

  • schedule
  • link to this workshop material
  • link to RStudio Cloud

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