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@Health-Informatics-UoN

University of Nottingham Health Informatics

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University of Nottingham Centre for Health Informatics

We are transforming health research with cutting-edge digital technology and data science. Our work enables discoveries that improve people’s lives and enhance public health.

Tools

Federated Research Logo

Federated Research is driven to transform how researchers securely access and analyse data across multiple locations. Achieved by promoting independent organisations to work together through agreed-upon standards, protocols, principles, while keeping control over their own data, services, or platforms.

Federated Research Repo Federated Research Docs


Bunny Logo

Website

Bunny is an application for fetching Cohort Discovery queries and resolving them against an OMOP database.

MIT License Bunny Repo Bunny Releases Bunny Tests Python Bunny Docker Images Bunny Docs Bunny Roadmap

Relay Logo

Relay is an application for enabling federated networks in Cohort Discovery, that implements the GA4GH Beacon API.

MIT License Relay Repo Relay Releases Relay Tests .NET Relay Docker Images Relay Docs Relay Roadmap


Carrot Logo

Carrot is an application stack for mapping and transforming health data to the OMOP common data model, in a secure way that enables collaboration and reusability.

Website

Carrot Mapper is a tool for mapping health data to the OMOP common data model, in a secure way enabling collaboration and reusability.

MIT License Carrot Mapper Repo Carrot Mapper Releases Carrot Mapper Tests Python Carrot Mapper Containers Carrot Mapper Docs Carrot Mapper Roadmap

Carrot Transform is a tool for executing mappings to transform health data to the OMOP common data model.

MIT License Carrot Transform Repo Carrot Transform Releases Carrot Transform Tests Python Carrot Transform Docs Carrot Transform Roadmap



Lettuce Logo

Lettuce uses an LLM for efficient translation and transformation into OMOP vocabulary.

Website

MIT License Lettuce Repo Lettuce Releases Python Lettuce Docs

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  1. carrot carrot Public

    Streamlined Data Transformation to OMOP

    MDX 8 1

  2. hutch hutch Public

    Hutch is the home of Bunny and Relay documentation and samples for Federated Discovery.

    MDX 4 1

  3. carrot-mapper carrot-mapper Public

    Streamlined Data Mapping to OMOP

    Python 19 6

  4. hutch-bunny hutch-bunny Public

    A Cohort Discovery Task Resolver.

    Python 7 6

  5. lettuce lettuce Public

    Python 9 1

Repositories

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