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Adding cycling to 3dvar_cf suite #752
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0a2be97
add 3dvar_cf_cyclu suite
mer-a-o 1e02506
save
mer-a-o 795fb5e
make sure cycles run one after another
mer-a-o 1520e12
save
mer-a-o fcb36f3
move rst_type to suite_config
mer-a-o 0338079
add save rst intervals
mer-a-o fd51692
some cleaning
mer-a-o e139ae8
save
mer-a-o a36a8a6
save and clean up
mer-a-o ff8df7c
add forecast frequency and clean scratch
mer-a-o ea65d0b
save
mer-a-o 7d8fcb1
save
mer-a-o 2380a80
some cleaning
mer-a-o c3ae936
bugfix
mer-a-o 882e804
update eva version
mer-a-o 502eecb
addressing comments
mer-a-o 6a0ba68
clean scratch in last cycle
mer-a-o 69f9719
save
mer-a-o 51e75f0
save test
mer-a-o 937384b
capture gcm_run.j log
mer-a-o cd3cf8f
fix tests
mer-a-o File filter
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779 changes: 779 additions & 0 deletions
779
src/swell/configuration/jedi/interfaces/geos_cf/namelists/AGCM_c360.rc
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775 changes: 775 additions & 0 deletions
775
src/swell/configuration/jedi/interfaces/geos_cf/namelists/AGCM_c90.rc
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34 changes: 34 additions & 0 deletions
34
src/swell/configuration/jedi/interfaces/geos_cf/namelists/CAP_c360.rc
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,34 @@ | ||
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| MAPLROOT_COMPNAME: GCM | ||
| ROOT_NAME: GCM | ||
| ROOT_CF: AGCM.rc | ||
| HIST_CF: HISTORY.rc | ||
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| # doesn't matter, cap_restart | ||
| BEG_DATE: 20000101 000000 | ||
| # can cap your run | ||
| END_DATE: 29990302 210000 | ||
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| # length of a sigle segment/job 1day | ||
| JOB_SGMT: >>>SWELL_FC_LENGTH<<< | ||
| # number of times you run the job/seg | ||
| NUM_SGMT: 1 | ||
| HEARTBEAT_DT: 300 | ||
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| USE_SHMEM: 0 | ||
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| # Parameters for Cycled REPLAY Forecasts | ||
| # -------------------------------------- | ||
| BEG_REPDATE: YYYYMMDD | ||
| END_REPDATE: YYYYMMDD | ||
| FCST_SEGMENT: 00000000 | ||
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| #PERPETUAL_YEAR: YYYY | ||
| #PERPETUAL_MONTH: MM | ||
| #PERPETUAL_DAY: DD | ||
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| MAPL_ENABLE_TIMERS: NO | ||
| MAPL_ENABLE_MEMUTILS: NO | ||
| PRINTSPEC: 0 # (0: OFF, 1: IMPORT & EXPORT, 2: IMPORT, 3: EXPORT) | ||
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| USE_EXTDATA2G: .TRUE. |
34 changes: 34 additions & 0 deletions
34
src/swell/configuration/jedi/interfaces/geos_cf/namelists/CAP_c90.rc
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,34 @@ | ||
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| MAPLROOT_COMPNAME: GCM | ||
| ROOT_NAME: GCM | ||
| ROOT_CF: AGCM.rc | ||
| HIST_CF: HISTORY.rc | ||
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| # doesn't matter, cap_restart | ||
| BEG_DATE: 20000101 000000 | ||
| # can cap your run | ||
| END_DATE: 29990302 210000 | ||
|
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| # length of a sigle segment/job 1day | ||
| JOB_SGMT: >>>SWELL_FC_LENGTH<<< | ||
| # number of times you run the job/seg | ||
| NUM_SGMT: 1 | ||
| HEARTBEAT_DT: 900 | ||
|
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| USE_SHMEM: 0 | ||
|
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| # Parameters for Cycled REPLAY Forecasts | ||
| # -------------------------------------- | ||
| BEG_REPDATE: YYYYMMDD | ||
| END_REPDATE: YYYYMMDD | ||
| FCST_SEGMENT: 00000000 | ||
|
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| #PERPETUAL_YEAR: YYYY | ||
| #PERPETUAL_MONTH: MM | ||
| #PERPETUAL_DAY: DD | ||
|
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||
| MAPL_ENABLE_TIMERS: NO | ||
| MAPL_ENABLE_MEMUTILS: NO | ||
| PRINTSPEC: 0 # (0: OFF, 1: IMPORT & EXPORT, 2: IMPORT, 3: EXPORT) | ||
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| USE_EXTDATA2G: .TRUE. |
19 changes: 19 additions & 0 deletions
19
src/swell/configuration/jedi/interfaces/geos_cf/namelists/GEOSCHEMchem_AnaSettings_CO.rc
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,19 @@ | ||
| SpeciesName: CO | ||
| Active: 0 | ||
| AnalysisFreq: 1 | ||
| AnalysisHour: 0 | ||
| AnalysisMinute: 0 | ||
| ForwardLooking: 0 | ||
| FileTemplate: >>>SWELL_RUNDIR<<</jedi.inc.%y4%m2%d2.%h2z.nc | ||
| FileVarName: CO | ||
| FileVarUnit: v/v | ||
| UseObsHour: 0 | ||
| ObsHourName: ana_hour | ||
| ApplyIncrement: 1 | ||
| InStrat: 0 | ||
| InTrop: 1 | ||
| AnaFraction: 1.0 | ||
| MaxChangeStrat: 0.0 | ||
| MaxChangeTrop: -1.0 | ||
| HasSpec2: 0 | ||
| ErrorMode: 1 | ||
20 changes: 20 additions & 0 deletions
20
src/swell/configuration/jedi/interfaces/geos_cf/namelists/GEOSCHEMchem_AnaSettings_NO2.rc
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| Original file line number | Diff line number | Diff line change |
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| @@ -0,0 +1,20 @@ | ||
| SpeciesName: NO2 | ||
|
Contributor
There was a problem hiding this comment. Choose a reason for hiding this commentThe reason will be displayed to describe this comment to others. Learn more. Same comment as above for RC files ... |
||
| Active: 1 | ||
| AnalysisFreq: 1 | ||
| AnalysisHour: 0 | ||
| AnalysisMinute: 0 | ||
| ForwardLooking: 0 | ||
| FileTemplate: >>>SWELL_RUNDIR<<</jedi.inc.%y4%m2%d2.%h2z.nc | ||
| FileVarName: NO2 | ||
| FileVarUnit: v/v | ||
| UseObsHour: 0 | ||
| ObsHourName: ana_hour | ||
| ApplyIncrement: 1 | ||
| InStrat: 0 | ||
| InTrop: 1 | ||
| IAU: 1 | ||
| AnaFraction: 1.0 | ||
| MaxChangeStrat: 0.0 | ||
| MaxChangeTrop: -1.0 | ||
| HasSpec2: 0 | ||
| ErrorMode: 1 | ||
31 changes: 31 additions & 0 deletions
31
src/swell/configuration/jedi/interfaces/geos_cf/namelists/GEOSCHEMchem_AnaSettings_O3.rc
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,31 @@ | ||
| SpeciesName: O3 | ||
| Active: 1 | ||
| AnalysisFreq: 3 | ||
| AnalysisHour: 1 | ||
| AnalysisMinute: 30 | ||
| ForwardLooking: 1 | ||
| FileTemplate: >>>SWELL_RUNDIR<<</jedi.inc.%y4%m2%d2.%h2z.nc | ||
| FileVarName: O3 | ||
| NonZeroIncOnly: 0 | ||
| FileVarNameInc: O3 | ||
| FileVarUnit: kg/kg | ||
| UseObsHour: 0 | ||
| ObsHourName: ana_hour | ||
| ApplyIncrement: 0 | ||
| InStrat: 1 | ||
| InTrop: 0 | ||
| AnaL1: 1 | ||
| AnaL2: 1 | ||
| AnaL3: 72 | ||
| AnaL4: 72 | ||
| StratSponge: 2 | ||
| AnaFraction: 0.2 | ||
| MaxChangeStrat: -1.0 | ||
| MaxChangeTrop: -1.0 | ||
| HasSpec2: 0 | ||
| Spec2Name: O,O1D | ||
| Spec2Strat: 1,1 | ||
| Spec2Trop: 1,0 | ||
| Spec2MinRatio: 0.1 | ||
| Spec2MaxRatio: 10.0 | ||
| ErrorMode: 1 |
2,769 changes: 2,769 additions & 0 deletions
2,769
src/swell/configuration/jedi/interfaces/geos_cf/namelists/GEOSCHEMchem_ExtData.yaml
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I puzzled as to why this RC and other RCs and GEOS yaml need to be here. These files should be in the tag of GEOS that supports CF, no? What am I missing?
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For each cycle,
FileTemplateis replaced to point to the JEDI increment file. I'm keeping all the RC files that are modified for each cycle in SWELL. The rest of RC files are copied from a tagged version of GEOS specified insuite_config.py:geos_cf_run_dir('/discover/nobackup/mabdiosk/rundir/GCv14.0_GCMv1.17_c90_Skylab')I think this way we can easily keep track of what goes into the swell experiment.