Updating to SCORPIO v2.0.1#8465
Open
jayeshkrishna wants to merge 5 commits into
Open
Conversation
Upgrading SCORPIO to version 2.0.0 SCORPIO version 2.0.0 includes, * Asynchronous I/O support (for HDF5 iotypes) * New Data rearranger (PIO_REARR_CONTIG) * New I/O decomposition logger * Moving to C++ data structures (lists etc) * Major code refactoring (source/headers are refactored and moved) * Bug fixes from maint/v1.9 branch * Misc enhancements - datatype converter, capture stack trace, GPTL timers, more tests, C++ unit testing framework * Configure settings for data compression and chunking * Misc bug fixes
Disable bget in SCORPIO for EAMXX standalone tests (to be in sync with how SCORPIO is built/used in E3SM builds)
bartgol
approved these changes
Jun 11, 2026
Adding path to HDF5 library for the anl gce compute nodes in eamxx standalone test machine configuration
When writing eamxx output ensure that variables (constants) are written out after ending the define mode
bartgol
approved these changes
Jun 17, 2026
SCORPIO v2.0.1 includes the following fixes, * Turn bget off by default in configure * In PIOc_initdecomp() allow compmap to be NULL when length is 0
bartgol
approved these changes
Jun 24, 2026
Contributor
Author
|
Only the zm_conv_omp tests in eamxx standalone tests fail (and this failure does not seem to be related to this PR) |
jayeshkrishna
added a commit
that referenced
this pull request
Jul 10, 2026
…8465) Upgrading SCORPIO to version 2.0.1 SCORPIO version 2.0.0 includes, * Asynchronous I/O support (for HDF5 iotypes) * New Data rearranger (PIO_REARR_CONTIG) * New I/O decomposition logger * Moving to C++ data structures (lists etc) * Major code refactoring (source/headers are refactored and moved) * Bug fixes from maint/v1.9 branch * Misc enhancements - datatype converter, capture stack trace, GPTL timers, more tests, C++ unit testing framework * Configure settings for data compression and chunking * Misc bug fixes SCORPIO version 2.0.1 includes the following fixes, * Turn bget off by default in configure * In PIOc_initdecomp() allow compmap to be NULL when length is 0 The PR also includes some minor changes to eamxx, * Turn off bget for eamxx standalone tests * Add paths to HDF5 libs for ANL compute nodes (for eamxx standalone tests) * Ensure that eamxx output writes are done after ending define mode [BFB] * jayeshkrishna/externals/scorpio_v2.0.0: Updating to SCORPIO v2.0.1 Write vars after ending define mode Adding HDF5 path for anlgce in eamxx mach specs Disable bget in SCORPIO Updating to SCORPIO v2.0.0
Contributor
Author
|
The E3SM nightly builds on Aurora (Intel oneapi) failed due to missing references to pthread functions/library. A fix for this issue will be available soon (The fix is available in E3SM-Project/scorpio#703). |
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
Upgrading SCORPIO to version 2.0.1
SCORPIO version 2.0.0 includes,
GPTL timers, more tests, C++ unit testing framework
SCORPIO version 2.0.1 includes the following fixes,
The PR also includes some minor changes to eamxx,
[BFB]