Diagnostic Image Analysis Group

Popular repositories Loading

1. rse-grand-challenge rse-grand-challenge Public

   A platform for end-to-end development of machine learning solutions in biomedical imaging

   Python 193 57

2. pathology-whole-slide-data pathology-whole-slide-data Public

   A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.

   Python 119 31

3. neural-odes-segmentation neural-odes-segmentation Public

   Neural Ordinary Differential Equations for Semantic Segmentation of Individual Colon Glands

   Python 111 28

4. StreamingCNN StreamingCNN Public

   To train deep convolutional neural networks, the input data and the activations need to be kept in memory. Given the limited memory available in current GPUs, this limits the maximum dimensions of …

   Jupyter Notebook 101 26

5. picai_labels picai_labels Public

   Annotations for the PI-CAI Challenge: Public Training and Development Dataset

   80 32

6. pathology-streaming-pipeline pathology-streaming-pipeline Public

   Use streaming to train whole-slides images with single image-level labels, by reducing GPU memory requirements with 99%.

   Python 79 13