Security updates

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Security Vulnerability Report

Generated on: 2026-01-07 00:30:09

Summary

Found vulnerabilities in 5 packages requiring updates.

Package Upgrades Overview

Package	Current Version	Recommended Version	Vulnerabilities
aiohttp	3.12.14	3.13.3	8
biopython	1.85	Unknown	1
filelock	3.18.0	3.20.1	1
nbconvert	7.16.6	Unknown	1
pymdown-extensions	10.16	10.16.1	1

Detailed Vulnerability Information

aiohttp (v3.12.14)

Vulnerability ID	Fix Versions	Aliases
CVE-2025-69223	3.13.3	GHSA-6mq8-rvhq-8wgg
CVE-2025-69224	3.13.3	GHSA-69f9-5gxw-wvc2
CVE-2025-69228	3.13.3	GHSA-6jhg-hg63-jvvf
CVE-2025-69229	3.13.3	GHSA-g84x-mcqj-x9qq
CVE-2025-69230	3.13.3	GHSA-fh55-r93g-j68g
CVE-2025-69226	3.13.3	GHSA-54jq-c3m8-4m76
CVE-2025-69227	3.13.3	GHSA-jj3x-wxrx-4x23
CVE-2025-69225	3.13.3	GHSA-mqqc-3gqh-h2x8

biopython (v1.85)

Vulnerability ID	Fix Versions	Aliases
CVE-2025-68463		GHSA-x3vf-39hj-gxr4

filelock (v3.18.0)

Vulnerability ID	Fix Versions	Aliases
CVE-2025-68146	3.20.1	GHSA-w853-jp5j-5j7f

nbconvert (v7.16.6)

Vulnerability ID	Fix Versions	Aliases
CVE-2025-53000		GHSA-xm59-rqc7-hhvf

pymdown-extensions (v10.16)

Vulnerability ID	Fix Versions	Aliases
CVE-2025-68142	10.16.1	GHSA-r6h4-mm7h-8pmq

Recommended Actions

1. Review the vulnerability details above.
2. Close and reopen this PR to trigger CI/CD tests.
3. Approve and merge the PR if everything looks good.

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This report was generated automatically. Please verify all upgrades before applying.