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add grch38 mobile elements files #118

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add grch38 mobile elements files #118

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87f2c7b
add grch38 mobile elements files
rannick Dec 11, 2025
45a055e
add configs
rannick Dec 11, 2025
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3 changes: 3 additions & 0 deletions rare-disease/annotation/grch38_svdb_query_bedpedbs_-v1.0-.csv
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filename,in_freq_info_key,in_allele_count_info_key,out_freq_info_key,out_allele_count_info_key
grch38_clinvar_sv_pathogenic_-20250728-.bedpe,,,clinvar_pathogenicFrq,clinvar_pathogenicOcc
grch38_clinvar_sv_non_pathogenic_-20250728-.bedpe,,,clinvar_non_pathogenicFrq,clinvar_non_pathogenicOcc
5 changes: 5 additions & 0 deletions rare-disease/annotation/grch38_svdb_query_dbs_-v1.0-.csv
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filename,in_freq_info_key,in_allele_count_info_key,out_freq_info_key,out_allele_count_info_key
grch38_svdb_query_decipher_Sept2015.vcf,FRQ,OCC,decipherAF,decipherOCC
grch38_gnomad.v4.1.sv.sites.no_cnv.vcf.gz,AF,AC,gnomad_svAF,gnomad_svAC
grch38_swegen_svdb_concat_sort_-20200608-.vcf,FRQ,OCC,swegenAF,swegenOC
grch38_loqusdb_sv_variants_export-sorted-20250903-.vcf.gz,Frq,Obs,clinical_genomics_loqusFrq,clinical_genomics_loqusObs
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