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Read MBARI BioArgo files into R

This package provides the facility to read the MBARI BioArgo float data into R, using the argo class inherited from the oce package.

Installation

The mbari package is not currently on CRAN. The best way to install mbari is to use the devtools package:

library(devtools)
install_github('richardsc/mbari', ref='master')

Example

Load one of the included data files, and plot an oxygen section using a cmocean colour scheme:

library(oce)
library(mbari)
d <- read.argo.mbari('inst/extdata/5145HawaiiQc.txt')
plot(as.section(d), which='oxygen', xtype='time', ztype='image', zcol=oceColorsOxygen)

5145Example

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Read MBARI Argo float data

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