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Create ImgCIF metadata from raw data, or a DIALS .expt file.

Setup

  1. If you don't already have the conda command, download and install Miniforge.
  2. Create the environment:
conda env create --file conda-env.yml
  1. Activate the environment:
conda activate imgcif-creator

Activating the environment is temporary: if you open another terminal, you'll need to run this step again.

Run in a terminal

With the environment set up, run:

python -m imgCIF_creator.tui path/to/some/data

You can run it on files or folders of data in CBF, HDF5, TIFF or SMV format. Alternatively, if you already have a DIALS .expt experiment file, you can use that as input.

Run the web interface

With the environment set up, run:

streamlit run streamlit-downloading.py

This will show a URL in the terminal to open in a browser. This accepts the same data formats as in the terminal, but here you start with the URLs to download them.

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Tools for creating imgCIF files from collections of raw data

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