Update post process pipeline to address reported issues#62

Merged

dimostzim merged 30 commits into

mainfrom

fix_post_processing

Jun 9, 2026

Commits on Apr 29, 2026

Propagate Nunique column and minor fixes
stephaniesamm
committed

Commits on Apr 30, 2026

Fix off by one sort bug for make negs
stephaniesamm
committed

Commits on May 8, 2026

Commits on May 11, 2026

Commits on May 12, 2026

Ran cut off selection experiment on Hejret & Manakov.
stephaniesamm
committed
Including list of neg sampling block labels of failing blocks in summary.
stephaniesamm
committed

Commits on May 18, 2026

Added genomic annotator.
stephaniesamm
committed

Commits on May 21, 2026

Reordered post process pipeline steps to annotate only positives, saving time.
stephaniesamm
committed

Commits on Jun 2, 2026

Refactored to handle running in cohort or single dset mode.
stephaniesamm
committed

Commits on Jun 3, 2026

Commits on Jun 4, 2026