[pre-commit.ci] pre-commit-autoupdate

.pre-commit-config.yaml

@@ -53,21 +53,21 @@ repos:
       - id: rst-inline-touching-normal
 
   - repo: https://github.com/rbubley/mirrors-prettier
-    rev: "v3.8.1"
+    rev: "v3.9.6"
     hooks:
       - id: prettier
         types_or: [yaml]
         args: [--prose-wrap=always]
 
   - repo: https://github.com/astral-sh/ruff-pre-commit
-    rev: "v0.15.9"
+    rev: "v0.16.1"
     hooks:
       - id: ruff-check
         args: ["--fix", "--show-fixes", "--exit-non-zero-on-fix"]
       - id: ruff-format
 
   - repo: https://github.com/codespell-project/codespell
-    rev: "v2.4.2"
+    rev: "v2.4.3"
     hooks:
       - id: codespell
         additional_dependencies:
@@ -88,20 +88,20 @@ repos:
         additional_dependencies: ["validate-pyproject-schema-store[all]"]
 
   - repo: https://github.com/python-jsonschema/check-jsonschema
-    rev: "0.37.1"
+    rev: "0.37.4"
     hooks:
       - id: check-dependabot
       - id: check-github-workflows
       - id: check-readthedocs
 
   - repo: https://github.com/DavidAnson/markdownlint-cli2
-    rev: v0.22.0
+    rev: v0.23.2
     hooks:
       - id: markdownlint-cli2
         args: []
 
   - repo: https://github.com/numpy/numpydoc
-    rev: v1.10.0
+    rev: v1.11.0rc0
     hooks:
       - id: numpydoc-validation
         exclude: "notebooks/"

src/afmslicer/_version.pyi

@@ -1,4 +1,2 @@
-from __future__ import annotations
-
 version: str
 version_tuple: tuple[int, int, int] | tuple[int, int, int, str, str]

src/afmslicer/entry_point.py

@@ -387,7 +387,7 @@ def afmslicer_parser() -> arg.ArgumentParser:
 
 def entry_point(
     manually_provided_args: list[Any] | None = None, testing: bool = False
-) -> None | arg.Namespace:
+) -> arg.Namespace | None:
     """
     Entry point for all AFMSlicer programs.
 

src/afmslicer/statistics.py

@@ -164,7 +164,7 @@ def create_statistics_dictionary(
 
 
 def calculate_pdf(
-    array: list[float], xmin: int | float | None = None, xmax: int | float | None = None
+    array: list[float], xmin: float | None = None, xmax: float | None = None
 ) -> dict[str, npt.NDArray]:
     """
     Calculate the scaled probability density function for an array.

tests/test_classes.py

@@ -84,8 +84,8 @@ def test_AFMSlicer(
     filename: str,
     img_path: Path,
     slices: int,
-    min_height: int | float,
-    max_height: int | float,
+    min_height: float,
+    max_height: float,
     layers: npt.NDArray[np.float64],
     pixel_to_nm_scaling: float,
     request,
@@ -194,8 +194,8 @@ def test_slice_image(
     filename: str,
     img_path: Path,
     slices: int,
-    min_height: int | float,
-    max_height: int | float,
+    min_height: float,
+    max_height: float,
     layers: npt.NDArray[np.float64],
     segment_method: str,
     sliced_array_fixture: str,