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lines changed Original file line number Diff line number Diff line change 6464# the dimension slider to compare channels 1 and 3 of round 1 (zero-based indexing),
6565# you can already see which cells express mouse ACTB and which cells express human ACTB.
6666#
67- # .. code-block:: python
68- #
69- # from starfish import display
70- #
71- # %gui qt
72- # viewer = display(imgs)
73- # viewer.layers[0].name = "raw stack" # rename the layer
67+ from starfish import display
68+ from napari . utils . notebook_display import nbscreenshot
69+
70+ % gui qt
71+ viewer = display ( imgs )
72+ viewer . layers [ 0 ]. name = "raw stack" # rename the layer
73+ nbscreenshot ( viewer )
7474
7575####################################################################################################
7676# **View codebook**
@@ -309,4 +309,4 @@ def make_expression_matrix(masks, decoded):
309309# :ref:`Data Formatting<section_formatting_data>` and then follow the :ref:`User
310310# Guide<user_guide>` to create a pipeline tailored to your data. If
311311# you want to try creating pipelines but don't have data yet, :py:mod:`starfish.data` has a
312- # number of example datasets you can experiment with.
312+ # number of example datasets you can experiment with.
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