Using mod functions from htslib #108
Workflow file for this run
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| name: DNMTools build (macOS) | |
| on: | |
| workflow_dispatch: | |
| push: | |
| branches: [ "master" ] | |
| pull_request: | |
| branches: [ "master" ] | |
| jobs: | |
| ## ADS: removing this because of 'brownout' on github runners | |
| # build-with-gcc-on-x86: | |
| # runs-on: macos-13 | |
| # steps: | |
| # - uses: actions/checkout@v4 | |
| # with: | |
| # submodules: recursive | |
| # - name: Update Homebrew | |
| # run: brew update | |
| # - name: Install autotools | |
| # run: brew install automake | |
| # - name: Install dependencies | |
| # run: brew install htslib gsl | |
| # - name: Generate configure script | |
| # run: ./autogen.sh | |
| # - name: configure with g++-14 | |
| # run: ./configure CXX="g++-14" CPPFLAGS="-I$(brew --prefix)/include" LDFLAGS="-L$(brew --prefix)/lib" | |
| # - name: make | |
| # run: make -j4 | |
| build-with-gcc-on-arm64: | |
| runs-on: macos-15 | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| submodules: recursive | |
| - name: Update Homebrew | |
| run: brew update | |
| - name: Install autotools | |
| run: brew install automake | |
| - name: Install dependencies | |
| run: brew install htslib gsl | |
| - name: Generate configure script | |
| run: ./autogen.sh | |
| - name: configure with g++-14 | |
| run: ./configure CXX="g++-14" CPPFLAGS="-I$(brew --prefix)/include" LDFLAGS="-L$(brew --prefix)/lib" | |
| - name: make | |
| run: make -j4 | |
| build-with-clang-on-arm64: | |
| runs-on: macos-15 | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| submodules: recursive | |
| - name: Update Homebrew | |
| run: brew update | |
| - name: Install autotools | |
| run: brew install automake | |
| - name: Install dependencies | |
| run: brew install htslib gsl | |
| - name: Generate configure script | |
| run: ./autogen.sh | |
| - name: configure with clang++ | |
| run: ./configure CXX="clang++" CPPFLAGS="-I$(brew --prefix)/include" LDFLAGS="-L$(brew --prefix)/lib" | |
| - name: make | |
| run: make -j4 |